RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 BRMS1LQ5PSV4 323 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 PQLC3Q8N755 202 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 PCDH19Q8TAB3 1148 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 IFT81Q8WYA0 676 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 RNF34Q969K3 372 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 SERPINB11Q96P15 392 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 CSPG4P5Q96PW8 444 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 OSER1Q9NX31 292 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 DNPEPQ9ULA0 475 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 LCHNA4D1U4 455 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 ITGAVP06756 1048 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 MYBL2P10244 700 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 ELF1P32519 619 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 CTNNB1P35222 781 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 ALDH1A3P47895 512 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 OASLQ15646 514 aaKnown RBP13.5□□□□□ -0.25
VAMP7-201ENST00000262640 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
VAMP7-201ENST00000262640 TCEAL8Q8IYN2 117 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 PYROXD2Q8N2H3 581 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 PDZD8Q8NEN9 1154 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 OVCA2Q8WZ82 227 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 CASP10Q92851 521 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 TKTL2Q9H0I9 626 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 CWC15Q9P013 229 aaKnown RBP13.5□□□□□ -0.25
VAMP7-201ENST00000262640 ZNF148Q9UQR1 794 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 YIPF1Q9Y548 306 aa13.5□□□□□ -0.25
VAMP7-201ENST00000262640 MYO16Q9Y6X6 1858 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 PRRG1O14668 218 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 MCF2LO15068 1137 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 TEX28O15482 410 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 ZDHHC11BP0C7U3 371 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 CSH1P0DML2 217 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 CSH2P0DML3 217 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 RBM10P98175 930 aaKnown RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 PTK6Q13882 451 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 AENQ8WTP8 325 aaKnown RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 P3H4Q92791 437 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 MAGEB5Q9BZ81 275 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 UBE2OQ9C0C9 1292 aaKnown RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 DPH5Q9H2P9 285 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 TMPRSS4Q9NRS4 437 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 NFU1Q9UMS0 254 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 DAPK3O43293 454 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 RARGP13631 454 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 PECAM1P16284 738 aaPredicted RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 GOT1P17174 413 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 CCR1P32246 355 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 PPP2R5DQ14738 602 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 VEPH1Q14D04 833 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 NOMO1Q15155 1222 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 EMBQ6PCB8 327 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 GSTA5Q7RTV2 222 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 GSPT2Q8IYD1 628 aaKnown RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 TRIM31Q9BZY9 425 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 ARHGEF38Q9NXL2 777 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 SAE1Q9UBE0 346 aaPredicted RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 SFMBT1Q9UHJ3 866 aa13.49□□□□□ -0.25
VAMP7-201ENST00000262640 MAGED2Q9UNF1 606 aaPredicted RBP13.49□□□□□ -0.25
VAMP7-201ENST00000262640 EEF2KO00418 725 aaKnown RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 CXCL14O95715 111 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 CA8P35219 290 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 HCAR3P49019 387 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 EIF3EP60228 445 aaKnown RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 SEMA3BQ13214 749 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 NNTQ13423 1086 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 HLTFQ14527 1009 aaKnown RBP eCLIP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 TRADDQ15628 312 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 TMC7Q7Z402 723 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ALLCQ8N6M5 410 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 CCHCR1Q8TD31 782 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 CDK5RAP1Q96SZ6 601 aaKnown RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ANLNQ9NQW6 1124 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 TLR6Q9Y2C9 796 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 LINC01553A4QN01 128 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 CREB3O43889 395 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 CNPP09543 421 aaKnown RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 SLC2A3P11169 496 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 NR2C2P49116 596 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 PLD1Q13393 1074 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 C1orf228Q6PIY5 440 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 DDX42Q86XP3 938 aaKnown RBP eCLIP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ZNF276Q8N554 614 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 TRMT2BQ96GJ1 504 aaKnown RBP13.48□□□□□ -0.25
VAMP7-201ENST00000262640 MYRFLQ96LU7 910 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 HAPLN3Q96S86 360 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 EPAS1Q99814 870 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 FAM129AQ9BZQ8 928 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 OSBPL2Q9H1P3 480 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ARHGEF4Q9NR80 690 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ZNF446Q9NWS9 450 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 ASIC3Q9UHC3 531 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 NUDT5Q9UKK9 219 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 NEU2Q9Y3R4 380 aa13.48□□□□□ -0.25
VAMP7-201ENST00000262640 INSL5Q9Y5Q6 135 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms