RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 ABCB5Q2M3G0 1257 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 TJAP1Q5JTD0 557 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 EPHA10Q5JZY3 1008 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 SHQ1Q6PI26 577 aaKnown RBP8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 RNF19BQ6ZMZ0 732 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 OTOAQ7RTW8 1153 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 SPATA20Q8TB22 786 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 RDH11Q8TC12 318 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 NSMCE2Q96MF7 247 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 MMTAG2Q9BU76 263 aaKnown RBP8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 TMEM117Q9H0C3 514 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 LRRC4BQ9NT99 713 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 C3orf18Q9UK00 162 aa8.55□□□□□ -1.04
SNCAIP-201ENST00000261367 HTR3EA5X5Y0 456 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CYP26A1O43174 497 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 MTRF1O75570 445 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 MYCP01106 439 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 PSAPP07602 524 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 RBP1P09455 135 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ITGA4P13612 1032 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SLC9A1P19634 815 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CRABP2P29373 138 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 RPA3P35244 121 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 RPL22P35268 128 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 USP10Q14694 798 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TSNQ15631 228 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 MAPRE1Q15691 268 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 AGAP9Q5VTM2 703 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ZDHHC13Q8IUH4 622 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SYTL1Q8IYJ3 562 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CENPLQ8N0S6 344 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 DCLK2Q8N568 766 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TMIEQ8NEW7 156 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 FAM45AQ8TCE6 357 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 C1orf21Q9H246 121 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 EPB41L1Q9H4G0 881 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 PLEKHA5Q9HAU0 1116 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TMEM8AQ9HCN3 771 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ETNK2Q9NVF9 386 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 DNAJC28Q9NX36 388 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ERVK-11Q9UQG0 969 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 BBIP1A8MTZ0 92 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SHBGP04278 402 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 MRPS22P82650 360 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SLC12A1Q13621 1099 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SQLEQ14534 574 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 LLGL1Q15334 1064 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TMEM26Q6ZUK4 368 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SLCO6A1Q86UG4 719 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TAGAPQ8N103 731 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 GPD1LQ8N335 351 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 PSMA8Q8TAA3 256 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 UBASH3BQ8TF42 649 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 NLRP4Q96MN2 994 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 C17orf80Q9BSJ5 609 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ACAT2Q9BWD1 397 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ABCB10Q9NRK6 738 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 VPS4AQ9UN37 437 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 PCDHGA3Q9Y5H0 932 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ISPDA4D126 451 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 POTEMA6NI47 508 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 A8MUI8 341 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 HOXD12P35452 270 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CDH6P55285 790 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SNAP25P60880 206 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TRIM32Q13049 653 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 PDK2Q15119 407 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ERAP2Q6P179 960 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 WDR59Q6PJI9 974 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TMEM270Q6UE05 265 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ARMCX2Q7L311 632 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 C16orf62Q7Z3J2 963 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ADHFE1Q8IWW8 467 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 KLF6Q99612 283 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SPRTNQ9H040 489 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CXorf21Q9HAI6 301 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SPAG4Q9NPE6 437 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 PRKAG3Q9UGI9 489 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 TK2O00142 265 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 DDX39AO00148 427 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SLC22A1O15245 554 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ADRA1DP25100 572 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 KHDC1Q4VXA5 237 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SH3D19Q5HYK7 790 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SLFN13Q68D06 897 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ZNF746Q6NUN9 644 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 GALNT18Q6P9A2 607 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 RDM1Q8NG50 284 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 ETNPPLQ8TBG4 499 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 USP13Q92995 863 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 SGF29Q96ES7 293 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CADM1Q9BY67 442 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 RMND5AQ9H871 391 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CHORDC1Q9UHD1 332 aaPredicted RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 CDH9Q9ULB4 789 aa8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
SNCAIP-201ENST00000261367 H0YJX3 145 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms