RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 EMC1Q8N766 993 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 TTC16Q8NEE8 873 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 FNIP1Q8TF40 1166 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 ELSPBP1Q96BH3 223 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 ZFRQ96KR1 1074 aaKnown RBP21.55■■□□□ 1.04
RTCA-201ENST00000260563 GOLPH3Q9H4A6 298 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 OBP2AQ9NY56 170 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 RRN3Q9NYV6 651 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 NUMBLQ9Y6R0 609 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 MYO10Q9HD67 2058 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 VIPR2P41587 438 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 SULT1E1P49888 294 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 OGDHQ02218 1023 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 USP4Q13107 963 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 HTR4Q13639 388 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 TANGO2Q6ICL3 276 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 ST13P5Q8NFI4 369 aaPredicted RBP21.55■■□□□ 1.04
RTCA-201ENST00000260563 KXD1Q9BQD3 176 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 KLF16Q9BXK1 252 aaPredicted RBP21.55■■□□□ 1.04
RTCA-201ENST00000260563 FAM204AQ9H8W3 233 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 JRKLQ9Y4A0 524 aa21.55■■□□□ 1.04
RTCA-201ENST00000260563 SLC12A8A0AV02 714 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 C2CD4BA6NLJ0 364 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 HEPACAM2A8MVW5 462 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 ANHXE9PGG2 379 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 LEFTY2O00292 366 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 FANCGO15287 622 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 MSI1O43347 362 aaKnown RBP21.54■■□□□ 1.04
RTCA-201ENST00000260563 ECI2O75521 394 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 PROSCO94903 275 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 TRUB2O95900 331 aaKnown RBP21.54■■□□□ 1.04
RTCA-201ENST00000260563 FTCDO95954 541 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 IRF1P10914 325 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 TCF3P15923 654 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 GPD1P21695 349 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 CASQ1P31415 396 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 COG7P83436 770 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 ZNF77Q15935 545 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 TJAP1Q5JTD0 557 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 ADAM32Q8TC27 787 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 SH3RF2Q8TEC5 729 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 LIMD1Q9UGP4 676 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 HBS1LQ9Y450 684 aaKnown RBP21.54■■□□□ 1.04
RTCA-201ENST00000260563 ALG6Q9Y672 507 aa21.54■■□□□ 1.04
RTCA-201ENST00000260563 PDGFRAP16234 1089 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 SDC4P31431 198 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 KPNA1P52294 538 aaPredicted RBP21.53■■□□□ 1.04
RTCA-201ENST00000260563 ZXDBP98169 803 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 ZNF252P-AS1Q0IIN9 211 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 NNTQ13423 1086 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 PIGHQ14442 188 aaPredicted RBP21.53■■□□□ 1.04
RTCA-201ENST00000260563 DNTTIP2Q5QJE6 756 aaKnown RBP21.53■■□□□ 1.04
RTCA-201ENST00000260563 TRNP1Q6NT89 227 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 PEX26Q7Z412 305 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 BPIFB1Q8TDL5 484 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 RXFP2Q8WXD0 754 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 ZNF592Q92610 1267 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 NXPE3Q969Y0 559 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 CFAP57Q96MR6 1250 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 NAPGQ99747 312 aaPredicted RBP21.53■■□□□ 1.04
RTCA-201ENST00000260563 DDX23Q9BUQ8 820 aaKnown RBP21.53■■□□□ 1.04
RTCA-201ENST00000260563 IGSF9Q9P2J2 1179 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 AMFRQ9UKV5 643 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 SH3BP1Q9Y3L3 701 aa21.53■■□□□ 1.04
RTCA-201ENST00000260563 CTAGE9A4FU28 777 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 IRAK2O43187 625 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 IGLV3-25P01717 112 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 HMBSP08397 361 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 DESP17661 470 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 COMTP21964 271 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 PSMA2P25787 234 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 GBP1P32455 592 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 MAN1A1P33908 653 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 SLC1A1P43005 524 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 ZNF143P52747 638 aaPredicted RBP21.52■■□□□ 1.04
RTCA-201ENST00000260563 PITX1P78337 314 aaPredicted RBP21.52■■□□□ 1.04
RTCA-201ENST00000260563 SLC25A52Q3SY17 297 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 MEI1Q5TIA1 1274 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 VITQ6UXI7 678 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 NT5DC3Q86UY8 548 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 NIPA2Q8N8Q9 360 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 DEPDC1BQ8WUY9 529 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 PLD4Q96BZ4 506 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 RSPRY1Q96DX4 576 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 NPY6RQ99463 290 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 KCNK12Q9HB15 430 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 RRAGDQ9NQL2 400 aaPredicted RBP21.52■■□□□ 1.04
RTCA-201ENST00000260563 GKN1Q9NS71 199 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 DDIT4Q9NX09 232 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 CFAP97Q9P2B7 532 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 LSM7Q9UK45 103 aaKnown RBP21.52■■□□□ 1.04
RTCA-201ENST00000260563 HYOU1Q9Y4L1 999 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 TICRRQ7Z2Z1 1910 aa21.52■■□□□ 1.04
RTCA-201ENST00000260563 SYNJ2BP-COX16A0A087WUM0 186 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 C19orf67A6NJJ6 358 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 M0QYT0 321 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 ENC1O14682 589 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 TBX4P57082 545 aa21.51■■□□□ 1.03
RTCA-201ENST00000260563 TRIP4Q15650 581 aaPredicted RBP21.51■■□□□ 1.03
RTCA-201ENST00000260563 ADAMTS19Q8TE59 1207 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms