RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TMEM39BQ9GZU3 492 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ANKEF1Q9NU02 776 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CROTQ9UKG9 612 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 DNPEPQ9ULA0 475 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 HBS1LQ9Y450 684 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 AK5Q9Y6K8 562 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 WTIPA6NIX2 430 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 DNM1LO00429 736 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 NUMBP49757 651 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 NR1H2P55055 460 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 GSTA3Q16772 222 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZFP1Q6P2D0 407 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 SH3BP5LQ7L8J4 393 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CHSY1Q86X52 802 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 APPL2Q8NEU8 664 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 FNIP1Q8TF40 1166 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF333Q96JL9 665 aa10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 PIN4Q9Y237 131 aaKnown RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATF5Q9Y2D1 282 aaPredicted RBP10.01□□□□□ -0.81
CTDSPL2-201ENST00000260327 CSE1LP55060 971 aaKnown RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 USP46P62068 366 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 PTAR1Q7Z6K3 402 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ALYREFQ86V81 257 aaKnown RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 EFHBQ8N7U6 833 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MTG1Q9BT17 334 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 RTFDC1Q9BY42 306 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 CLEC4MQ9H2X3 399 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 CCDC167Q9P0B6 97 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ADAMTS13Q76LX8 1427 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 TMEM150BA6NC51 233 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SDR42E2A6NKP2 422 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 EFCAB14O75071 495 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SEMA3DO95025 777 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SERPINE1P05121 402 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FCGR1AP12314 374 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 DALRD3Q5D0E6 543 aaKnown RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SPANXN2Q5MJ10 180 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 POLR1BQ9H9Y6 1135 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FBXO6Q9NRD1 293 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 AFF2P51816 1311 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 TISP43B9A030 160 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 PMPCBO75439 489 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 CSHL1Q14406 222 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZIK1Q3SY52 487 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 AGAP9Q5VTM2 703 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 PRAMEF18Q5VWM3 479 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM180AQ6UWF9 173 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FBXW8Q8N3Y1 598 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 UTP15Q8TED0 518 aaKnown RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SH3KBP1Q96B97 665 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 OTUD5Q96G74 571 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MAGED4Q96JG8 741 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 RIBC2Q9H4K1 309 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 USP18Q9UMW8 372 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM86B1E9PN63 330 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ADRA2BP18089 450 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 CCT8P50990 548 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FASTKQ14296 549 aaKnown RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 POLNQ7Z5Q5 900 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 EXOC3L1Q86VI1 746 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MAGEE2Q8TD90 523 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MED15Q96RN5 788 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRIM45Q9H8W5 580 aaPredicted RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MEGF6O75095 1541 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ARHGEF28Q8N1W1 1705 aaKnown RBP10□□□□□ -0.81
CTDSPL2-201ENST00000260327 LOC100506127A0A0U1RQW1 187 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 KANSL1LA0AUZ9 987 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 CBFA2T3O75081 653 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 LDLRP01130 860 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SERPIND1P05546 499 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 RARBP10826 455 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ETS1P14921 441 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 CHRM3P20309 590 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MAGP20916 626 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 COX10Q12887 443 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SPIDRQ14159 915 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM13CQ8NE31 585 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 SH3TC2Q8TF17 1288 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 BAP1Q92560 729 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 KAT5Q92993 513 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 PHF21BQ96EK2 531 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF560Q96MR9 790 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 NRDE2Q9H7Z3 1164 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 TELO2Q9Y4R8 837 aa10□□□□□ -0.81
CTDSPL2-201ENST00000260327 MRASO14807 208 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 VIL1P09327 827 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC12A3P55017 1021 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CYP24A1Q07973 514 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 BLMHQ13867 455 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZSWIM7Q19AV6 140 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 CEP41Q9BYV8 373 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 EHD3Q9NZN3 535 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 STX7O15400 261 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MARCKSL1P49006 195 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 PPP1R15BQ5SWA1 713 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 EFCAB12Q6NXP0 572 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MREGQ8N565 214 aa9.99□□□□□ -0.81
CTDSPL2-201ENST00000260327 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms