RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TCEA3O75764 348 aa28.69■■■□□ 2.18
CCM2-201ENST00000258781 OR1G1P47890 313 aa28.69■■■□□ 2.18
CCM2-201ENST00000258781 TMCO2Q7Z6W1 182 aaPredicted RBP28.69■■■□□ 2.18
CCM2-201ENST00000258781 CDKL3Q8IVW4 592 aaPredicted RBP28.69■■■□□ 2.18
CCM2-201ENST00000258781 SAYSD1Q9NPB0 183 aa28.69■■■□□ 2.18
CCM2-201ENST00000258781 PIGVQ9NUD9 493 aa28.69■■■□□ 2.18
CCM2-201ENST00000258781 RGS16O15492 202 aaPredicted RBP28.68■■■□□ 2.18
CCM2-201ENST00000258781 OAZ2O95190 189 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 CENPUQ71F23 418 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 SLC7A14Q8TBB6 771 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 EPS8L3Q8TE67 593 aaKnown RBP28.68■■■□□ 2.18
CCM2-201ENST00000258781 TRIM62Q9BVG3 475 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 PRG3Q9Y2Y8 225 aaPredicted RBP28.68■■■□□ 2.18
CCM2-201ENST00000258781 ABHD14A-ACY1A0A1B0GW23 586 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 TLDC2A0PJX2 215 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 TBKBP1A7MCY6 615 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 H3BRJ5 948 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 HOXA2O43364 376 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 AGTP01019 485 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 ATP1A2P50993 1020 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 MAGOHP61326 146 aaKnown RBP28.68■■■□□ 2.18
CCM2-201ENST00000258781 DEFB103AP81534 67 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 NME3Q13232 169 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 EFHC2Q5JST6 749 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 SPATA2LQ8IUW3 424 aaPredicted RBP28.68■■■□□ 2.18
CCM2-201ENST00000258781 SERPINB12Q96P63 405 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 PAK5Q9P286 719 aa28.68■■■□□ 2.18
CCM2-201ENST00000258781 HPDP32754 393 aaPredicted RBP28.67■■■□□ 2.18
CCM2-201ENST00000258781 ACTN2P35609 894 aa28.67■■■□□ 2.18
CCM2-201ENST00000258781 SCAPQ12770 1279 aa28.67■■■□□ 2.18
CCM2-201ENST00000258781 BEND5Q7L4P6 421 aa28.67■■■□□ 2.18
CCM2-201ENST00000258781 PYROXD2Q8N2H3 581 aa28.67■■■□□ 2.18
CCM2-201ENST00000258781 MAGEB5Q9BZ81 275 aa28.67■■■□□ 2.18
CCM2-201ENST00000258781 VWA8A3KMH1 1905 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 ALOX15BO15296 676 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 EIF3HO15372 352 aaKnown RBP eCLIP28.66■■■□□ 2.18
CCM2-201ENST00000258781 F9P00740 461 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 NCAM1P13591 858 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 GOT1P17174 413 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 PPP2R2AP63151 447 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 HIF1AQ16665 826 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 TNFAIP8L3Q5GJ75 292 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 RNF139Q8WU17 664 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 C9orf72Q96LT7 481 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 WDR6Q9NNW5 1121 aaKnown RBP28.66■■■□□ 2.18
CCM2-201ENST00000258781 ZNF638Q14966 1978 aaKnown RBP28.66■■■□□ 2.18
CCM2-201ENST00000258781 SYNJ2BP-COX16A0A087WUM0 186 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 SYN3O14994 580 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 KCNN4O15554 427 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 IRAK1P51617 712 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 ARL4CP56559 192 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 GNGT1P63211 74 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 AUHQ13825 339 aaKnown RBP28.66■■■□□ 2.18
CCM2-201ENST00000258781 ANKRD22Q5VYY1 191 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 NCBP2-AS2Q69YL0 99 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 C4orf22Q6V702 233 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 C16orf59Q7L2K0 433 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 DCP1BQ8IZD4 617 aaKnown RBP28.66■■■□□ 2.18
CCM2-201ENST00000258781 ZCWPW1Q9H0M4 648 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 COX16Q9P0S2 106 aa28.66■■■□□ 2.18
CCM2-201ENST00000258781 SF3B1O75533 1304 aaKnown RBP eCLIP28.65■■■□□ 2.182e-7■■■■■ 82.1
CCM2-201ENST00000258781 IVLP07476 585 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 AMPD1P23109 780 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 RBL1P28749 1068 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 ADRA1BP35368 520 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 WDR5P61964 334 aaKnown RBP28.65■■■□□ 2.18
CCM2-201ENST00000258781 GBE1Q04446 702 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 STAT4Q14765 748 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 SLC45A4Q5BKX6 768 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 LEKR1Q6ZMV7 388 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 BZW1Q7L1Q6 419 aaKnown RBP28.65■■■□□ 2.18
CCM2-201ENST00000258781 TOP1MTQ969P6 601 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 QKIQ96PU8 341 aaKnown RBP eCLIP28.65■■■□□ 2.18
CCM2-201ENST00000258781 CCDC77Q9BR77 488 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 ARHGEF4Q9NR80 690 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 FBXW11Q9UKB1 542 aa28.65■■■□□ 2.18
CCM2-201ENST00000258781 SMIM23A6NLE4 172 aa28.64■■■□□ 2.18
CCM2-201ENST00000258781 DGKIO75912 1065 aa28.64■■■□□ 2.18
CCM2-201ENST00000258781 C7orf61Q8IZ16 206 aa28.64■■■□□ 2.18
CCM2-201ENST00000258781 BADQ92934 168 aa28.64■■■□□ 2.18
CCM2-201ENST00000258781 MRPL9Q9BYD2 267 aaKnown RBP28.64■■■□□ 2.18
CCM2-201ENST00000258781 IL23AQ9NPF7 189 aa28.64■■■□□ 2.18
CCM2-201ENST00000258781 TADA2AO75478 443 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 PBX3P40426 434 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 SLC10A2Q12908 348 aaPredicted RBP28.63■■■□□ 2.17
CCM2-201ENST00000258781 B4GALNT4Q76KP1 1039 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 OTOP2Q7RTS6 562 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 DDIT4Q9NX09 232 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 PRKAG2Q9UGJ0 569 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 SLC12A6Q9UHW9 1150 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 A0A087WUV0 522 aaPredicted RBP28.63■■■□□ 2.17
CCM2-201ENST00000258781 HACD1B0YJ81 288 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 CHADO15335 359 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 MDH1P40925 334 aaKnown RBP28.63■■■□□ 2.17
CCM2-201ENST00000258781 BASP1P80723 227 aaKnown RBP28.63■■■□□ 2.17
CCM2-201ENST00000258781 LONRF1Q17RB8 773 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 SKIDA1Q1XH10 827 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 BSPRYQ5W0U4 402 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 LRRC43Q8N309 656 aa28.63■■■□□ 2.17
CCM2-201ENST00000258781 OLFM3Q96PB7 478 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms