RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ZCCHC23Q6ZST2 131 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 DNAJC9Q8WXX5 260 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 ABTB1Q969K4 478 aaPredicted RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 MMP19Q99542 508 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 EIF2AQ9BY44 585 aaKnown RBP10.47□□□□□ -0.73
COPB1-201ENST00000249923 SLC13A1Q9BZW2 595 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 MIS12Q9H081 205 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 IL1RAPL1Q9NZN1 696 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 SIRPGQ9P1W8 387 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 SCOCQ9UIL1 159 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 EMCNQ9ULC0 261 aa10.47□□□□□ -0.73
COPB1-201ENST00000249923 IQANK1A0A1B0GTG1 560 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 KLF11O14901 512 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 KRT36O76013 467 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 LUC7L3O95232 432 aaKnown RBP10.46□□□□□ -0.73
COPB1-201ENST00000249923 CYP2F1P24903 491 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 BAG6P46379 1132 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 BCAR1P56945 870 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 OLIG2Q13516 323 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 KPNB1Q14974 876 aaKnown RBP10.46□□□□□ -0.73
COPB1-201ENST00000249923 FAM47CQ5HY64 1035 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 GLRA4Q5JXX5 417 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 ARMCX2Q7L311 632 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 KBTBD7Q8WVZ9 684 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 KCTD15Q96SI1 283 aaPredicted RBP10.46□□□□□ -0.73
COPB1-201ENST00000249923 EBF4Q9BQW3 602 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 NT5C1AQ9BXI3 368 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 TRIM55Q9BYV6 548 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 PAK5Q9P286 719 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 AKT3Q9Y243 479 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 FAM159BA6NKW6 160 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 SMAPO00193 183 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 FCHO1O14526 889 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 NDC80O14777 642 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 APOL1O14791 398 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 SPTLC1O15269 473 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 SMNDC1O75940 238 aaKnown RBP eCLIP10.46□□□□□ -0.73
COPB1-201ENST00000249923 CYP2C8P10632 490 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 CCDC130P13994 396 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 LMO2P25791 158 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 PHKA2P46019 1235 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 SLC26A2P50443 739 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 ARFIP2P53365 341 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 SLC6A3Q01959 620 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 KRT81Q14533 505 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 TTC39BQ5VTQ0 682 aaPredicted RBP10.46□□□□□ -0.73
COPB1-201ENST00000249923 BSPRYQ5W0U4 402 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 USP6NLQ92738 828 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 BTBD10Q9BSF8 475 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 ITGA11Q9UKX5 1188 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 C2CD2Q9Y426 696 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 PSAT1Q9Y617 370 aa10.46□□□□□ -0.73
COPB1-201ENST00000249923 PLXNB2O15031 1838 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 CAPN9O14815 690 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 MDM4O15151 490 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 SNNO75324 88 aaPredicted RBP10.46□□□□□ -0.74
COPB1-201ENST00000249923 HAUS5O94927 633 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 STAU1O95793 577 aaKnown RBP10.46□□□□□ -0.74
COPB1-201ENST00000249923 APOEP02649 317 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 RARBP10826 455 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 TGM2P21980 687 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 OSBPP22059 807 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 EPHB1P54762 984 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 POU5F1BQ06416 359 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 KLC1Q07866 573 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 TMEM62Q0P6H9 643 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 NCBP2-AS2Q69YL0 99 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 ANO7Q6IWH7 933 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 AFG1LQ8WV93 481 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 UCMAQ8WVF2 138 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 CENPIQ92674 756 aaPredicted RBP10.46□□□□□ -0.74
COPB1-201ENST00000249923 KIF12Q96FN5 646 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 CYP4F11Q9HBI6 524 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 DTLQ9NZJ0 730 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 GTF2IRD1Q9UHL9 959 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 ZNF180Q9UJW8 692 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 MAGED2Q9UNF1 606 aaPredicted RBP10.46□□□□□ -0.74
COPB1-201ENST00000249923 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.74
COPB1-201ENST00000249923 E2F8A0AVK6 867 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
COPB1-201ENST00000249923 TROVE2P10155 538 aaKnown RBP eCLIP10.45□□□□□ -0.74
COPB1-201ENST00000249923 ESRRAP11474 423 aaPredicted RBP10.45□□□□□ -0.74
COPB1-201ENST00000249923 HIC1Q14526 733 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 ZBTB6Q15916 424 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 DPYSL2Q16555 572 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 MROH9Q5TGP6 573 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 ZNF483Q8TF39 744 aaPredicted RBP10.45□□□□□ -0.74
COPB1-201ENST00000249923 GORASP1Q9BQQ3 440 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 ZNF670Q9BS34 389 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 CEP41Q9BYV8 373 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 PCMTD2Q9NV79 361 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.45□□□□□ -0.74
COPB1-201ENST00000249923 ZBED1O96006 694 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 AMPD1P23109 780 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 ADCYAP1R1P41586 468 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 TUBB3Q13509 450 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 TFDP2Q14188 446 aa10.45□□□□□ -0.74
COPB1-201ENST00000249923 PDK2Q15119 407 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms