RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 PRR11Q96HE9 360 aaPredicted RBP16.97■□□□□ 0.31
HOXD3-201ENST00000249440 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
HOXD3-201ENST00000249440 PCMTD2Q9NV79 361 aa16.97■□□□□ 0.31
HOXD3-201ENST00000249440 MYO18AQ92614 2054 aaKnown RBP16.96■□□□□ 0.31
HOXD3-201ENST00000249440 BIRC5O15392 142 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 OCRLQ01968 901 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 CDK18Q07002 472 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 RFWD3Q6PCD5 774 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 DSTYKQ6XUX3 929 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 ARID3BQ8IVW6 561 aaPredicted RBP16.96■□□□□ 0.31
HOXD3-201ENST00000249440 ARHGAP24Q8N264 748 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 MPP5Q8N3R9 675 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 ANKRD52Q8NB46 1076 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 OPTNQ96CV9 577 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 CSPG4P5Q96PW8 444 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 NMUR2Q9GZQ4 415 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 WWP1Q9H0M0 922 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 MTMR10Q9NXD2 777 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 MOCS1Q9NZB8 636 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 STOML1Q9UBI4 398 aa16.96■□□□□ 0.31
HOXD3-201ENST00000249440 LIN7AO14910 233 aaPredicted RBP16.96■□□□□ 0.3
HOXD3-201ENST00000249440 ECM2O94769 699 aaPredicted RBP16.96■□□□□ 0.3
HOXD3-201ENST00000249440 ATXN1P54253 815 aaKnown RBP16.96■□□□□ 0.3
HOXD3-201ENST00000249440 BCAT1P54687 386 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 ZBTB6Q15916 424 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 GRIK4Q16099 956 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 SLC27A1Q6PCB7 646 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 TIFABQ6ZNK6 161 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 RINLQ6ZS11 566 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 TTC7BQ86TV6 843 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 CRLF3Q8IUI8 442 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 HACE1Q8IYU2 909 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 TEX9Q8N6V9 391 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 HTR3CQ8WXA8 447 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 SNX27Q96L92 541 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 CXCL16Q9H2A7 254 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.3
HOXD3-201ENST00000249440 HMX2A2RU54 273 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 CYB561D2O14569 222 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 RARBP10826 455 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 SOWAHAQ2M3V2 549 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 MARCH8Q5T0T0 291 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ALYREFQ86V81 257 aaKnown RBP16.95■□□□□ 0.3
HOXD3-201ENST00000249440 SMC1BQ8NDV3 1235 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 TFB1MQ8WVM0 346 aaKnown RBP16.95■□□□□ 0.3
HOXD3-201ENST00000249440 KCTD15Q96SI1 283 aaPredicted RBP16.95■□□□□ 0.3
HOXD3-201ENST00000249440 TRIM56Q9BRZ2 755 aaKnown RBP16.95■□□□□ 0.3
HOXD3-201ENST00000249440 DPEP3Q9H4B8 488 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 DONSONQ9NYP3 566 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 DTLQ9NZJ0 730 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ARMCX1Q9P291 453 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 RBM47A0AV96 593 aaKnown RBP16.95■□□□□ 0.3
HOXD3-201ENST00000249440 HACD1B0YJ81 288 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 BPGMP07738 259 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 MLNP12872 115 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 LCP1P13796 627 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 FDFT1P37268 417 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ARL4AP40617 200 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ADCYAP1R1P41586 468 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 GRIA1P42261 906 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ACADSBP45954 432 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 KIZQ2M2Z5 673 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ZNF792Q3KQV3 632 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 TEX44Q53QW1 395 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 CMPK2Q5EBM0 449 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 NCBP2-AS2Q69YL0 99 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 STRADAQ7RTN6 431 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 STKLD1Q8NE28 680 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 SUFUQ9UMX1 484 aa16.95■□□□□ 0.3
HOXD3-201ENST00000249440 ATP5BP06576 529 aaKnown RBP16.94■□□□□ 0.3
HOXD3-201ENST00000249440 ADORA2BP29275 332 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 HOXA11P31270 313 aaPredicted RBP16.94■□□□□ 0.3
HOXD3-201ENST00000249440 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
HOXD3-201ENST00000249440 CCDC6Q16204 474 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 TSNAXIP1Q2TAA8 658 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 NBPF20Q3BBV1 942 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 KYAT3Q6YP21 454 aaKnown RBP16.94■□□□□ 0.3
HOXD3-201ENST00000249440 TMPRSS6Q8IU80 811 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 CCDC33Q8N5R6 958 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 CCDC185Q8N715 623 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 CDKL2Q92772 493 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 MAGEB5Q9BZ81 275 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 DNAI2Q9GZS0 605 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.94■□□□□ 0.3
HOXD3-201ENST00000249440 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
HOXD3-201ENST00000249440 A0A0A0MRY4 1105 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CCDC195A0A1B0GUA6 201 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 SNNO75324 88 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 ALDH1A2O94788 518 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 ATP6V1C1P21283 382 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 AMPD1P23109 780 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 ADORA2AP29274 412 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 AQP5P55064 265 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CCNA1P78396 465 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 BLMHQ13867 455 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms