RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 SIX4Q9UIU6 781 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 VILLO15195 856 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 GREM1O60565 184 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 TSPAN3O60637 253 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 SEMA4FO95754 770 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
RFPL3-201ENST00000249007 ZNF131P52739 623 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 BCAT1P54687 386 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 ME3Q16798 604 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 C6orf132Q5T0Z8 1188 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 SNX30Q5VWJ9 437 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 KIAA1614Q5VZ46 1190 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 KDM7AQ6ZMT4 941 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 ZNF574Q6ZN55 896 aaPredicted RBP12.64□□□□□ -0.39
RFPL3-201ENST00000249007 LIMS2Q7Z4I7 341 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 UCMAQ8WVF2 138 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 PDLIM2Q96JY6 352 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 FAM213AQ9BRX8 229 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 ZHX3Q9H4I2 956 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 SLC27A6Q9Y2P4 619 aa12.64□□□□□ -0.39
RFPL3-201ENST00000249007 R3HCC1Q9Y3T6 440 aaKnown RBP12.64□□□□□ -0.39
RFPL3-201ENST00000249007 CENPEQ02224 2701 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 TERTO14746 1132 aaKnown RBP12.63□□□□□ -0.39
RFPL3-201ENST00000249007 MPOP05164 745 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 EPHX1P07099 455 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 WARSP23381 471 aaKnown RBP12.63□□□□□ -0.39
RFPL3-201ENST00000249007 PRKCHP24723 683 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 RACK1P63244 317 aaKnown RBP12.63□□□□□ -0.39
RFPL3-201ENST00000249007 INSM1Q01101 510 aaPredicted RBP12.63□□□□□ -0.39
RFPL3-201ENST00000249007 ZNF234Q14588 700 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 POSTNQ15063 836 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 GEN1Q17RS7 908 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 GPBP1Q86WP2 473 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 BRSK2Q8IWQ3 736 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 C8orf76Q96K31 380 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 FIZ1Q96SL8 496 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 ZNF518BQ9C0D4 1074 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 MTMR12Q9C0I1 747 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 BTBD1Q9H0C5 482 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 LHX5Q9H2C1 402 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 IKZF4Q9H2S9 585 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 ADAMTS1Q9UHI8 967 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 LSM7Q9UK45 103 aaKnown RBP12.63□□□□□ -0.39
RFPL3-201ENST00000249007 FBXO10Q9UK96 956 aa12.63□□□□□ -0.39
RFPL3-201ENST00000249007 YKT6O15498 198 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 TLR5O60602 858 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 GP1BBP13224 206 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 CKMT2P17540 419 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 PRPHP41219 470 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 MFAP3P55082 362 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 GOLGA8FQ08AF8 430 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 GOLGA8DPQ0D2H9 430 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 E2F5Q15329 346 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 SHBQ15464 509 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 DNTTIP2Q5QJE6 756 aaKnown RBP12.62□□□□□ -0.39
RFPL3-201ENST00000249007 SERPINA13PQ6UXR4 307 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 LSMEM2Q8N112 164 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 SCAMP5Q8TAC9 235 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 SKA1Q96BD8 255 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 HPDLQ96IR7 371 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
RFPL3-201ENST00000249007 MMS19Q96T76 1030 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 ORAI3Q9BRQ5 295 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.62□□□□□ -0.39
RFPL3-201ENST00000249007 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
RFPL3-201ENST00000249007 PCDHB1Q9Y5F3 818 aa12.62□□□□□ -0.39
RFPL3-201ENST00000249007 TBCAO75347 108 aaKnown RBP12.61□□□□□ -0.39
RFPL3-201ENST00000249007 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
RFPL3-201ENST00000249007 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
RFPL3-201ENST00000249007 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 EPHA8P29322 1005 aaPredicted RBP12.61□□□□□ -0.39
RFPL3-201ENST00000249007 ARRB1P49407 418 aaPredicted RBP12.61□□□□□ -0.39
RFPL3-201ENST00000249007 ERVPABLB-1P60509 514 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 GABREP78334 506 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 DHX8Q14562 1220 aaKnown RBP12.61□□□□□ -0.39
RFPL3-201ENST00000249007 ATG14Q6ZNE5 492 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 OR2T3Q8NH03 318 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 SAAL1Q96ER3 474 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 SLC6A18Q96N87 628 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 SNX25Q9H3E2 840 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 ZKSCAN5Q9Y2L8 839 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 ITPR2Q14571 2701 aa12.61□□□□□ -0.39
RFPL3-201ENST00000249007 K7ENP7 123 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 CLDN5O00501 218 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 TBX18O95935 607 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 MT-CO3P00414 261 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 ZDHHC11BP0C7U3 371 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 PTPN1P18031 435 aaKnown RBP12.6□□□□□ -0.39
RFPL3-201ENST00000249007 GNL1P36915 607 aaPredicted RBP12.6□□□□□ -0.39
RFPL3-201ENST00000249007 TOB1P50616 345 aaPredicted RBP12.6□□□□□ -0.39
RFPL3-201ENST00000249007 SLC5A3P53794 718 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 GRIN1Q05586 938 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 EIF4HQ15056 248 aaKnown RBP12.6□□□□□ -0.39
RFPL3-201ENST00000249007 TMEM119Q4V9L6 283 aa12.6□□□□□ -0.39
RFPL3-201ENST00000249007 INO80CQ6PI98 192 aaPredicted RBP12.6□□□□□ -0.39
RFPL3-201ENST00000249007 ZSWIM2Q8NEG5 633 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms