RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 V9GYQ6 96 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 UMODL1Q5DID0 1318 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 LIN7AO14910 233 aaPredicted RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 AKAP10O43572 662 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 ABL2P42684 1182 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 USP4Q13107 963 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 ACSS3Q9H6R3 686 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 FKBP6O75344 327 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 PMLP29590 882 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 PTAR1Q7Z6K3 402 aaPredicted RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 ZNF333Q96JL9 665 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 LGALS13Q9UHV8 139 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 STIP1P31948 543 aaKnown RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 CYP1B1Q16678 543 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 PRAMEF19Q5SWL8 479 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 MARK2Q7KZI7 788 aaKnown RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 DAW1Q8N136 415 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 TINF2Q9BSI4 451 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 PHACTR1Q9C0D0 580 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 COPS7BQ9H9Q2 264 aaPredicted RBP13.76□□□□□ -0.21
PEX1-201ENST00000248633 SLC39A10Q9ULF5 831 aa13.76□□□□□ -0.21
PEX1-201ENST00000248633 SPAG6O75602 509 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 FGFR3P22607 806 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 RBL1P28749 1068 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 MIPP30301 263 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 AVPR1AP37288 418 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 CCNFP41002 786 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 SLC1A6P48664 564 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 TRIM67Q6ZTA4 783 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 EZH1Q92800 747 aaPredicted RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 DNAJC1Q96KC8 554 aaKnown RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 BFARQ9NZS9 450 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 POLIQ9UNA4 740 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 RPS6KL1Q9Y6S9 549 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 A0A087WZ62 844 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 RALBP11234 206 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 CCNB1P14635 433 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 TUBP50607 506 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 GDF10P55107 478 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 NRF1Q16656 503 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 AMHR2Q16671 573 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 KCTD21Q4G0X4 260 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 TXNRD3NBQ6F5E7 133 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 DIS3LQ8TF46 1054 aaKnown RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 FDXACB1Q9BRP7 624 aaPredicted RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 LGALS2P05162 132 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 PDGFRBP09619 1106 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 TFE3P19532 575 aaPredicted RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 GPD1P21695 349 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 AP3M2P53677 418 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 KIZQ2M2Z5 673 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 STKLD1Q8NE28 680 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 KIF12Q96FN5 646 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 MARK4Q96L34 752 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 SEMA6AQ9H2E6 1030 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 RNPEPQ9H4A4 650 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 SETD4Q9NVD3 440 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 STX18Q9P2W9 335 aaKnown RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 PGAP2Q9UHJ9 254 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 KCNH4Q9UQ05 1017 aa13.75□□□□□ -0.21
PEX1-201ENST00000248633 PIN4Q9Y237 131 aaKnown RBP13.75□□□□□ -0.21
PEX1-201ENST00000248633 GOLGA8TH3BQL2 631 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 OGTO15294 1046 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 PRPF4O43172 522 aaKnown RBP eCLIP13.74□□□□□ -0.21
PEX1-201ENST00000248633 ITGB3P05106 788 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 FSTL1Q12841 308 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 C12orf50Q8NA57 414 aaPredicted RBP13.74□□□□□ -0.21
PEX1-201ENST00000248633 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 PPP1R13LQ8WUF5 828 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 RXFP2Q8WXD0 754 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 SNX9Q9Y5X1 595 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 FESP07332 822 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 MAPK10P53779 464 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 SP2Q02086 613 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 BSNDQ8WZ55 320 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 PRR11Q96HE9 360 aaPredicted RBP13.74□□□□□ -0.21
PEX1-201ENST00000248633 HAUS8Q9BT25 410 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 GPR88Q9GZN0 384 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 LRRC4Q9HBW1 653 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 CAPN8A6NHC0 703 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
PEX1-201ENST00000248633 PYGLP06737 847 aa13.74□□□□□ -0.21
PEX1-201ENST00000248633 CD48P09326 243 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms