RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 HAUS2Q9NVX0 235 aa13.17□□□□□ -0.3
SNAI1-201ENST00000244050 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNAI1-201ENST00000244050 SQORQ9Y6N5 450 aa13.17□□□□□ -0.3
SNAI1-201ENST00000244050 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
SNAI1-201ENST00000244050 A0A1W2PPM1 405 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 ARVCFO00192 962 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 ZNF623O75123 536 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 SKIP12755 728 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 ZFXP17010 805 aaPredicted RBP13.16□□□□□ -0.3
SNAI1-201ENST00000244050 GNL1P36915 607 aaPredicted RBP13.16□□□□□ -0.3
SNAI1-201ENST00000244050 MSH2P43246 934 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 SCNN1GP51170 649 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 DSC3Q14574 896 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 DPYSL2Q16555 572 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 PDK4Q16654 411 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 RNF43Q68DV7 783 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 CGB2Q6NT52 195 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 SLC39A5Q6ZMH5 540 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 MRPL10Q7Z7H8 261 aaKnown RBP13.16□□□□□ -0.3
SNAI1-201ENST00000244050 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 MZB1Q8WU39 189 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 DCAKDQ8WVC6 231 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 ALKBH8Q96BT7 664 aaKnown RBP13.16□□□□□ -0.3
SNAI1-201ENST00000244050 PGBD4Q96DM1 585 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 HSFY1Q96LI6 401 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 CYTH2Q99418 400 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 PITPNM3Q9BZ71 974 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 TSPYL2Q9H2G4 693 aaPredicted RBP13.16□□□□□ -0.3
SNAI1-201ENST00000244050 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 DPEP3Q9H4B8 488 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 PNPLA8Q9NP80 782 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 KLC4Q9NSK0 619 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 PHF24Q9UPV7 400 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 TEX264Q9Y6I9 313 aa13.16□□□□□ -0.3
SNAI1-201ENST00000244050 A0A0U1RQF3 1178 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 ATP2C2O75185 946 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 ZWINTO95229 277 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 FAM163BP0C2L3 166 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 CA4P22748 312 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 L1CAMP32004 1257 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 RPA3P35244 121 aaPredicted RBP13.15□□□□□ -0.3
SNAI1-201ENST00000244050 ELK3P41970 407 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 AFF1P51825 1210 aaKnown RBP13.15□□□□□ -0.3
SNAI1-201ENST00000244050 NRLP54845 237 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 CA9Q16790 459 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 ADGRF2Q8IZF7 708 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 C4orf33Q8N1A6 199 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 LBHD1Q9BQE6 289 aaPredicted RBP13.15□□□□□ -0.3
SNAI1-201ENST00000244050 B3GNT5Q9BYG0 378 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 KIF9Q9HAQ2 790 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 MIOSQ9NXC5 875 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 KLHL14Q9P2G3 628 aa13.15□□□□□ -0.3
SNAI1-201ENST00000244050 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.15□□□□□ -0.3
SNAI1-201ENST00000244050 CFAP73A6NFT4 308 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 KCNN4O15554 427 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 PDGFRBP09619 1106 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 FGFR1P11362 822 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 KRT4P19013 534 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 RBL1P28749 1068 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 NR2C2P49116 596 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 CLCNKBP51801 687 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.31
SNAI1-201ENST00000244050 BNIP1Q12981 228 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 EFTUD2Q15029 972 aaKnown RBP eCLIP13.15□□□□□ -0.317e-7■■■■□ 20.1
SNAI1-201ENST00000244050 SLC1A5Q15758 541 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 IGDCC3Q8IVU1 814 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 CDKL3Q8IVW4 592 aaPredicted RBP13.15□□□□□ -0.31
SNAI1-201ENST00000244050 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.31
SNAI1-201ENST00000244050 TOP6BLQ8N6T0 577 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 MCUQ8NE86 351 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 RXFP1Q9HBX9 757 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 RAB6BQ9NRW1 208 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 ATP11BQ9Y2G3 1177 aa13.15□□□□□ -0.31
SNAI1-201ENST00000244050 CASTOR2A6NHX0 329 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 CYB561D2O14569 222 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 TM9SF1O15321 606 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 HCRTO43612 131 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 UBOX5O94941 541 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 ZBED1O96006 694 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 CYP2F1P24903 491 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 LMO2P25791 158 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 GBP2P32456 591 aaPredicted RBP13.14□□□□□ -0.31
SNAI1-201ENST00000244050 SHHQ15465 462 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 ZKSCAN8Q15776 578 aaPredicted RBP13.14□□□□□ -0.31
SNAI1-201ENST00000244050 TRIM60Q495X7 471 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 C9orf50Q5SZB4 431 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 CYB5D1Q6P9G0 228 aa13.14□□□□□ -0.31
SNAI1-201ENST00000244050 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms