RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 AHSPQ9NZD4 102 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 NPHP4O75161 1426 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 PVALEFA0A1B0GWK0 134 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 CCSAPQ6IQ19 270 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 DEFB129Q9H1M3 183 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 MRGBPQ9NV56 204 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 SPG21Q9NZD8 308 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 KLHL41O60662 606 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 RFC5P40937 340 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 NPY2RP49146 381 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 INSCQ1MX18 579 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 PIGKQ92643 395 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 PDGFDQ9GZP0 370 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 VPS33BQ9H267 617 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 COMMD8Q9NX08 183 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 ZNF112Q9UJU3 913 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 ZNF232Q9UNY5 417 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 ASXL3Q9C0F0 2248 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 PTGES3LE9PB15 166 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 ECDO95905 644 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 PSMB9P28065 219 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 S100GP29377 79 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 SERPINH1P50454 418 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 SRP54P61011 504 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 EID3Q8N140 333 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 GUF1Q8N442 669 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 VANGL2Q9ULK5 521 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 GARTP22102 1010 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 GMPSP49915 693 aaPredicted RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 CSHL1Q14406 222 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 CCT8L2Q96SF2 557 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 UBE2OQ9C0C9 1292 aaKnown RBP13.54□□□□□ -0.24
NEK9-201ENST00000238616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.245e-7■■■□□ 17.3
NEK9-201ENST00000238616 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
NEK9-201ENST00000238616 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TIMM44O43615 452 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 UQCRBP14927 111 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 MTAPQ13126 283 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 FAM171A1Q5VUB5 890 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 C11orf63Q6NUN7 778 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 OMA1Q96E52 524 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 CEP41Q9BYV8 373 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 PRODHO43272 600 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 NDUFB10O96000 172 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 ZCCHC18P0CG32 403 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 HPCAL1P37235 193 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TAF2Q6P1X5 1199 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 DNAJC14Q6Y2X3 702 aaPredicted RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 ZNF621Q6ZSS3 439 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 CCDC126Q96EE4 140 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TMEM79Q9BSE2 394 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TMA7Q9Y2S6 64 aaKnown RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 FDFT1P37268 417 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 STX5Q13190 355 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TIMM13Q9Y5L4 95 aaPredicted RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 TRIM49D1C9J1S8 452 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 IFNA14P01570 189 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 EPORP19235 508 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 NUP107P57740 925 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 MYBPC1Q00872 1141 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 SPIDRQ14159 915 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TMEM26Q6ZUK4 368 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 FICDQ9BVA6 458 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 ABCG4Q9H172 646 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 ZDHHC6Q9H6R6 413 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 CRYL1Q9Y2S2 319 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 PDXKO00764 312 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 KRR1Q13601 381 aaKnown RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 PALB2Q86YC2 1186 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 PCDHB2Q9Y5E7 798 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 EFCAB10A6NFE3 127 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 POLR2EP19388 210 aaKnown RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 GPR15P49685 360 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 SKP1P63208 163 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 PLD1Q13393 1074 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 SLC29A2Q14542 456 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 SMU1Q2TAY7 513 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TCHHL1Q5QJ38 904 aaPredicted RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 USP27XA6NNY8 438 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TMEM114B3SHH9 223 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 FOXP2O15409 715 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 AGTP01019 485 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
NEK9-201ENST00000238616 NECTIN1Q15223 517 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 TMEM138Q9NPI0 162 aa13.53□□□□□ -0.24
NEK9-201ENST00000238616 ATP7BP35670 1465 aa13.52□□□□□ -0.24
NEK9-201ENST00000238616 RAPSNQ13702 412 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms