RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CCNG2Q16589 344 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 WDR93Q6P2C0 686 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 JAMLQ86YT9 394 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 ARHGAP18Q8N392 663 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 ACTL9Q8TC94 416 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 NTAN1Q96AB6 310 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 FAF2Q96CS3 445 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 MAK16Q9BXY0 300 aaKnown RBP19.29■□□□□ 0.68
SNX17-201ENST00000233575 CCSER2Q9H7U1 834 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 COMMD8Q9NX08 183 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 YBX2Q9Y2T7 364 aaKnown RBP19.29■□□□□ 0.68
SNX17-201ENST00000233575 C2orf71A6NGG8 1288 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 LIASO43766 372 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 FNTAP49354 379 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 OTUD4Q01804 1114 aaKnown RBP19.29■□□□□ 0.68
SNX17-201ENST00000233575 CREMQ03060 361 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 EFEMP1Q12805 493 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 EFHC2Q5JST6 749 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 MAATS1Q7Z4T9 603 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 PLD5Q8N7P1 536 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 RNF34Q969K3 372 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 CSPG4P5Q96PW8 444 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 C10orf88Q9H8K7 445 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 TLR9Q9NR96 1032 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 CLIC5Q9NZA1 410 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 LZTS1Q9Y250 596 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 SSX2IPQ9Y2D8 614 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 MFHAS1Q9Y4C4 1052 aa19.29■□□□□ 0.68
SNX17-201ENST00000233575 C5orf67F2Z3F1 127 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 CREB3O43889 395 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 CLCN6P51797 869 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 SCAPQ12770 1279 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 PLD1Q13393 1074 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 MSANTD2Q6P1R3 559 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 LILRA6Q6PI73 481 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 SND1Q7KZF4 910 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNX17-201ENST00000233575 DDX42Q86XP3 938 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNX17-201ENST00000233575 PSTKQ8IV42 348 aaKnown RBP19.28■□□□□ 0.68
SNX17-201ENST00000233575 CASKIN2Q8WXE0 1202 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 TRIM31Q9BZY9 425 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 ETNK2Q9NVF9 386 aa19.28■□□□□ 0.68
SNX17-201ENST00000233575 MAP3K6O95382 1288 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 AMPD1P23109 780 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 GBP1P32455 592 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 DHX34Q14147 1143 aaKnown RBP19.27■□□□□ 0.68
SNX17-201ENST00000233575 C1orf228Q6PIY5 440 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 MRPL43Q8N983 215 aaKnown RBP19.27■□□□□ 0.68
SNX17-201ENST00000233575 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.27■□□□□ 0.68
SNX17-201ENST00000233575 CCDC114Q96M63 670 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 CEP295NLQ96MC4 621 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 UBE2OQ9C0C9 1292 aaKnown RBP19.27■□□□□ 0.68
SNX17-201ENST00000233575 CERS4Q9HA82 394 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 GDF3Q9NR23 364 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 XPO7Q9UIA9 1087 aaKnown RBP19.27■□□□□ 0.68
SNX17-201ENST00000233575 RWDD3Q9Y3V2 267 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 IRAK3Q9Y616 596 aa19.27■□□□□ 0.68
SNX17-201ENST00000233575 ADH1AP07327 375 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 CSH1P0DML2 217 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 CSH2P0DML3 217 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 KLRC2P26717 231 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 CARSP49589 748 aaKnown RBP19.27■□□□□ 0.67
SNX17-201ENST00000233575 PSEN1P49768 467 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 C10orf120Q5SQS8 335 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 SLC9A4Q6AI14 798 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 B4GALNT4Q76KP1 1039 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 DNAJB7Q7Z6W7 309 aaPredicted RBP19.27■□□□□ 0.67
SNX17-201ENST00000233575 PRUNE1Q86TP1 453 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 MIB1Q86YT6 1006 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 ZNF512Q96ME7 567 aaPredicted RBP19.27■□□□□ 0.67
SNX17-201ENST00000233575 ARHGEF38Q9NXL2 777 aa19.27■□□□□ 0.67
SNX17-201ENST00000233575 BHMG1C9JSJ3 638 aaPredicted RBP19.26■□□□□ 0.67
SNX17-201ENST00000233575 APOC4-APOC2K7ER74 178 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 TLR5O60602 858 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 APOC2P02655 101 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 AIF1P55008 147 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 SEMA3BQ13214 749 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 BYSLQ13895 437 aaKnown RBP19.26■□□□□ 0.67
SNX17-201ENST00000233575 ARL13BQ3SXY8 428 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 VSIG1Q86XK7 387 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 SLC35B2Q8TB61 432 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 MICAL1Q8TDZ2 1067 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 MYRFLQ96LU7 910 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 SERPINB11Q96P15 392 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 DPH5Q9H2P9 285 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 HOMER3Q9NSC5 361 aa19.26■□□□□ 0.67
SNX17-201ENST00000233575 ZNF840PA6NDX5 716 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 APOL1O14791 398 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 ECEL1O95672 775 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 ARL4AP40617 200 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 TFDP2Q14188 446 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 TRIP13Q15645 432 aaPredicted RBP19.25■□□□□ 0.67
SNX17-201ENST00000233575 OASLQ15646 514 aaKnown RBP19.25■□□□□ 0.67
SNX17-201ENST00000233575 FAM182AQ5T1J6 154 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 CCNI2Q6ZMN8 369 aaPredicted RBP19.25■□□□□ 0.67
SNX17-201ENST00000233575 CCDC33Q8N5R6 958 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 NETO2Q8NC67 525 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 LRRN4Q8WUT4 740 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 IFT81Q8WYA0 676 aa19.25■□□□□ 0.67
SNX17-201ENST00000233575 ZNF334Q9HCZ1 680 aaPredicted RBP19.25■□□□□ 0.67
SNX17-201ENST00000233575 ARHGEF4Q9NR80 690 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms