RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 GSE1Q14687 1217 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 SFMBT2Q5VUG0 894 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 INO80CQ6PI98 192 aaPredicted RBP17.34■□□□□ 0.37
SPCS1-201ENST00000233025 KDM7AQ6ZMT4 941 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 SCAMP5Q8TAC9 235 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 CACTINQ8WUQ7 758 aaKnown RBP17.34■□□□□ 0.37
SPCS1-201ENST00000233025 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.34■□□□□ 0.37
SPCS1-201ENST00000233025 KLF16Q9BXK1 252 aaPredicted RBP17.34■□□□□ 0.37
SPCS1-201ENST00000233025 DOCK9Q9BZ29 2069 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 DPH1Q9BZG8 443 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 MTMR12Q9C0I1 747 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 LHX5Q9H2C1 402 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.34■□□□□ 0.37
SPCS1-201ENST00000233025 IL37Q9NZH6 218 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 ADAMTS1Q9UHI8 967 aa17.34■□□□□ 0.37
SPCS1-201ENST00000233025 FAM92AA1XBS5 289 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 YKT6O15498 198 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 FSBPO95073 299 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 WNT1P04628 370 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 MPOP05164 745 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 IGHV4-34P06331 123 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 CKMT2P17540 419 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 ABCD1P33897 745 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 PGFP49763 221 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 BCAT1P54687 386 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 ERVPABLB-1P60509 514 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 HS2ST1Q7LGA3 356 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 KRI1Q8N9T8 703 aaKnown RBP17.33■□□□□ 0.36
SPCS1-201ENST00000233025 OR2T3Q8NH03 318 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 SLC6A18Q96N87 628 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 ASCL3Q9NQ33 180 aa17.33■□□□□ 0.36
SPCS1-201ENST00000233025 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
SPCS1-201ENST00000233025 TDRD6O60522 2096 aaKnown RBP17.33■□□□□ 0.36
SPCS1-201ENST00000233025 NYNRINQ9P2P1 1898 aaKnown RBP17.33■□□□□ 0.36
SPCS1-201ENST00000233025 TLR5O60602 858 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 MT-CO3P00414 261 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 PENKP01210 267 aaPredicted RBP17.32■□□□□ 0.36
SPCS1-201ENST00000233025 EPHX1P07099 455 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 CAMK2GQ13555 558 aaPredicted RBP17.32■□□□□ 0.36
SPCS1-201ENST00000233025 C6orf132Q5T0Z8 1188 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 DTHD1Q6ZMT9 781 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 KANSL1Q7Z3B3 1105 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 GPBP1Q86WP2 473 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 EXD3Q8N9H8 876 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 UCMAQ8WVF2 138 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 FAM213AQ9BRX8 229 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 NACA2Q9H009 215 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 BTBD1Q9H0C5 482 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 ST6GALNAC4Q9H4F1 302 aa17.32■□□□□ 0.36
SPCS1-201ENST00000233025 CLDN5O00501 218 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 ACP1P24666 158 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 SLC5A3P53794 718 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 GABREP78334 506 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 GRIN1Q05586 938 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 POSTNQ15063 836 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 Q6ZNB5 142 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 ATG14Q6ZNE5 492 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 LSMEM2Q8N112 164 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 SAAL1Q96ER3 474 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 HPDLQ96IR7 371 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 PIWIL1Q96J94 861 aaKnown RBP17.31■□□□□ 0.36
SPCS1-201ENST00000233025 MRPL45Q9BRJ2 306 aaKnown RBP17.31■□□□□ 0.36
SPCS1-201ENST00000233025 B3GNT5Q9BYG0 378 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 DPEP3Q9H4B8 488 aa17.31■□□□□ 0.36
SPCS1-201ENST00000233025 RBAKQ9NYW8 714 aaPredicted RBP17.31■□□□□ 0.36
SPCS1-201ENST00000233025 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
SPCS1-201ENST00000233025 TBX18O95935 607 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 NFKB2Q00653 900 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 PROX2Q3B8N5 592 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 FYB2Q5VWT5 728 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 SERPINA13PQ6UXR4 307 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 ANKS1BQ7Z6G8 1248 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 SORCS1Q8WY21 1168 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 VCPIP1Q96JH7 1222 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 KCNK16Q96T55 309 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 STARD5Q9NSY2 213 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 ELOVL2Q9NXB9 296 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 LSM7Q9UK45 103 aaKnown RBP17.3■□□□□ 0.36
SPCS1-201ENST00000233025 C2CD3Q4AC94 2353 aa17.3■□□□□ 0.36
SPCS1-201ENST00000233025 CENPEQ02224 2701 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 A0A1W2PPC4 97 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 SUV39H1O43463 412 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 PPP1R37O75864 691 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 PTPN1P18031 435 aaKnown RBP17.29■□□□□ 0.36
SPCS1-201ENST00000233025 LSSP48449 732 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 SKOR1P84550 965 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 EIF4HQ15056 248 aaKnown RBP17.29■□□□□ 0.36
SPCS1-201ENST00000233025 RABEP1Q15276 862 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 TMEM215Q68D42 235 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 KIAA0895LQ68EN5 471 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 EBF2Q9HAK2 575 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 SGK2Q9HBY8 427 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 PDE11AQ9HCR9 933 aa17.29■□□□□ 0.36
SPCS1-201ENST00000233025 TULP1O00294 542 aaPredicted RBP17.28■□□□□ 0.36
SPCS1-201ENST00000233025 AFPP02771 609 aaKnown RBP17.28■□□□□ 0.36
SPCS1-201ENST00000233025 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
SPCS1-201ENST00000233025 ARRB1P49407 418 aaPredicted RBP17.28■□□□□ 0.36
SPCS1-201ENST00000233025 E2F1Q01094 437 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms