RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 DHX35Q9H5Z1 703 aaKnown RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 ZNF395Q9H8N7 513 aaPredicted RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 SNX9Q9Y5X1 595 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 A6NHS1 94 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 A6NJR5 290 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 PPEF2O14830 753 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 NVLO15381 856 aaKnown RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 BIRC5O15392 142 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 TOMM70O94826 608 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 ZFXP17010 805 aaPredicted RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 GRM5P41594 1212 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 GRIA1P42261 906 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 NR2C2P49116 596 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 ATXN1P54253 815 aaKnown RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 SESN3P58005 492 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 MUM1Q2TAK8 710 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 KCNT2Q6UVM3 1135 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 LMNTD2Q8IXW0 634 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 ARHGAP24Q8N264 748 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 DEPDC1BQ8WUY9 529 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 CXCL16Q9H2A7 254 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 MTMR10Q9NXD2 777 aa16.82■□□□□ 0.28
LTBR-201ENST00000228918 PPARGC1AQ9UBK2 798 aaKnown RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 HBS1LQ9Y450 684 aaKnown RBP16.82■□□□□ 0.28
LTBR-201ENST00000228918 CPA2P48052 419 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 RAP1GDS1P52306 607 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 TIFABQ6ZNK6 161 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 CRLF3Q8IUI8 442 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 STKLD1Q8NE28 680 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 CLEC4CQ8WTT0 213 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 CENPIQ92674 756 aaPredicted RBP16.81■□□□□ 0.28
LTBR-201ENST00000228918 KCTD15Q96SI1 283 aaPredicted RBP16.81■□□□□ 0.28
LTBR-201ENST00000228918 MAGEB5Q9BZ81 275 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 C20orf27Q9GZN8 174 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 MOCS1Q9NZB8 636 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 ZFATQ9P243 1243 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 GTF2IRD1Q9UHL9 959 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 AP4E1Q9UPM8 1137 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 COL1A2P08123 1366 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 ADM5C9JUS6 153 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 MAGEC1O60732 1142 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 ENO1P06733 434 aaKnown RBP16.81■□□□□ 0.28
LTBR-201ENST00000228918 PGM1P36871 562 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 AQP5P55064 265 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 SNX16P57768 344 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 LAMC2Q13753 1193 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 NBPF20Q3BBV1 942 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 STEAP4Q687X5 459 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 SLC26A9Q7LBE3 791 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 TMPRSS6Q8IU80 811 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 ADGRF2Q8IZF7 708 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 CCDC33Q8N5R6 958 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 NRG4Q8WWG1 115 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 CSPG4P5Q96PW8 444 aa16.81■□□□□ 0.28
LTBR-201ENST00000228918 MARCOQ9UEW3 520 aaPredicted RBP16.81■□□□□ 0.28
LTBR-201ENST00000228918 A8MXQ7 604 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 B2RBV5 119 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 H3BRJ5 948 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 CXCL11O14625 94 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 CAPN9O14815 690 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 TOP3BO95985 862 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 ZNF286BP0CG31 522 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 CNTFP26441 200 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 SLC34A1Q06495 639 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 ARHGAP17Q68EM7 881 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 NCBP2-AS2Q69YL0 99 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 HEATR6Q6AI08 1181 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 MTHFD1LQ6UB35 978 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 CYS1Q717R9 158 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 ARMCX2Q7L311 632 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 ARCQ7LC44 396 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 PDCD7Q8N8D1 485 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 MROH8Q9H579 483 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 DTLQ9NZJ0 730 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 STX18Q9P2W9 335 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 ASB14A6NK59 587 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 EIF4E1BA6NMX2 242 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 TBX10O75333 385 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 ATP5BP06576 529 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 KITP10721 976 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 VAV1P15498 845 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 WASHC5Q12768 1159 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 DBN1Q16643 649 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 LRRC74BQ6ZQY2 392 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 MARK2Q7KZI7 788 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 FBXO27Q8NI29 283 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 STMN2Q93045 179 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 ZMAT2Q96NC0 199 aaKnown RBP16.8■□□□□ 0.28
LTBR-201ENST00000228918 LPIN3Q9BQK8 851 aa16.8■□□□□ 0.28
LTBR-201ENST00000228918 MYO18AQ92614 2054 aaKnown RBP16.79■□□□□ 0.28
LTBR-201ENST00000228918 ALDH1A2O94788 518 aa16.79■□□□□ 0.28
LTBR-201ENST00000228918 IREB2P48200 963 aaKnown RBP16.79■□□□□ 0.28
LTBR-201ENST00000228918 MRPS35P82673 323 aaKnown RBP16.79■□□□□ 0.28
LTBR-201ENST00000228918 STX3Q13277 289 aa16.79■□□□□ 0.28
LTBR-201ENST00000228918 SOWAHAQ2M3V2 549 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms