RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 TFR2Q9UP52 801 aa19.46■□□□□ 0.71
SMPD3-201ENST00000219334 TBC1D3BA6NDS4 549 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 PAEPP09466 180 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 RRM2P31350 389 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 BCL2L1Q07817 233 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 LRRC23Q53EV4 343 aaPredicted RBP19.45■□□□□ 0.7
SMPD3-201ENST00000219334 WLSQ5T9L3 541 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 NSL1Q96IY1 281 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 HTATIP2Q9BUP3 242 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 BMP10O95393 424 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 IFNA14P01570 189 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 TPBGLP0DKB5 382 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 CCNG2Q16589 344 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 CHADLQ6NUI6 762 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 PALB2Q86YC2 1186 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 RECQL4O94761 1208 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 NEK2P51955 445 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 RGL4Q8IZJ4 473 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 VPS50Q96JG6 964 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 SERAC1Q96JX3 654 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 PABPC3Q9H361 631 aaKnown RBP19.45■□□□□ 0.7
SMPD3-201ENST00000219334 SNTNA6NMZ2 147 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 MICAL2O94851 1124 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 CPSF4O95639 269 aaKnown RBP19.45■□□□□ 0.7
SMPD3-201ENST00000219334 STAU1O95793 577 aaKnown RBP19.45■□□□□ 0.7
SMPD3-201ENST00000219334 RPN2P04844 631 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 BTNL9Q6UXG8 535 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 SENP8Q96LD8 212 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 BCORL1Q5H9F3 1711 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 TCRBV5S4A2TA0A5A2 114 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 KRT6AP02538 564 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 KRT6BP04259 564 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 BDNFP23560 247 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 KRT6CP48668 564 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 NUDT2P50583 147 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 MGAT5Q09328 741 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 PKN1Q16512 942 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 GALNT4Q8N4A0 578 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 ACTL9Q8TC94 416 aa19.45■□□□□ 0.7
SMPD3-201ENST00000219334 O00370 1275 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 IRF6O14896 467 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 ILF2Q12905 390 aaKnown RBP19.44■□□□□ 0.7
SMPD3-201ENST00000219334 POU6F1Q14863 301 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 SLC9A5Q14940 896 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 CACUL1Q86Y37 369 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 PRKD2Q9BZL6 878 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 KCNF1Q9H3M0 494 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 NCKIPSDQ9NZQ3 722 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 A0A0A6YYK5 440 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-201ENST00000219334 MTA2O94776 668 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 OR56A5P0C7T3 313 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 CCNG1P51959 295 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 CREMQ03060 361 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 TRPM8Q7Z2W7 1104 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 SLC26A11Q86WA9 606 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 DEFB106AQ8N104 65 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 OSBPL10Q9BXB5 764 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 THOP1P52888 689 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 GCNT1Q02742 428 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 DNAJC3Q13217 504 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 CELF3Q5SZQ8 465 aaKnown RBP19.44■□□□□ 0.7
SMPD3-201ENST00000219334 CYP4Z1Q86W10 505 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 ZSCAN32Q9NX65 697 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 NDOR1Q9UHB4 597 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 BCL9O00512 1426 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 UBA1P22314 1058 aaKnown RBP19.44■□□□□ 0.7
SMPD3-201ENST00000219334 FBXL19Q6PCT2 694 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 MCOLN2Q8IZK6 566 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 PACSIN1Q9BY11 444 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 EVA1BQ9NVM1 165 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 UBA2Q9UBT2 640 aaPredicted RBP19.44■□□□□ 0.7
SMPD3-201ENST00000219334 TRHDEQ9UKU6 1024 aa19.44■□□□□ 0.7
SMPD3-201ENST00000219334 ERI2A8K979 691 aaKnown RBP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 EIF3HO15372 352 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 DEAF1O75398 565 aaPredicted RBP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 LENG9Q96B70 501 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 THAP11Q96EK4 314 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 PSMA4P25789 261 aaKnown RBP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 CTNNB1P35222 781 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 HLA-DQA1Q5Y7H0 255 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 C11orf63Q6NUN7 778 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 SLC22A9Q8IVM8 553 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 MED8Q96G25 268 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 SEC16BQ96JE7 1060 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 UROC1Q96N76 676 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 TMEM245Q9H330 911 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 CYP39A1Q9NYL5 469 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 ADCY6O43306 1168 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 ALBP02768 609 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 SCNN1GP51170 649 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 BOP1Q14137 746 aaKnown RBP19.43■□□□□ 0.7
SMPD3-201ENST00000219334 FIBCD1Q8N539 461 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 TEX9Q8N6V9 391 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 PPP1R16AQ96I34 528 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 KRT84Q9NSB2 600 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 USE1Q9NZ43 259 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 PGK1P00558 417 aa19.43■□□□□ 0.7
SMPD3-201ENST00000219334 ATP5C1P36542 298 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms