RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CKMT2P17540 419 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 KLRC2P26717 231 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 SMTNL2Q2TAL5 461 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 MTX3Q5HYI7 312 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ACAD10Q6JQN1 1059 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 OLIG1Q8TAK6 271 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 NSUN4Q96CB9 384 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 COQ7Q99807 217 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 POLE4Q9NR33 117 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 DDX28Q9NUL7 540 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ANKRD34BA5PLL1 514 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 F5H423 210 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 CYP1A2P05177 515 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 OCA2Q04671 838 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 TRIM28Q13263 835 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 SLC9A4Q6AI14 798 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 CIAPIN1Q6FI81 312 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 NEPROQ6NW34 567 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 CASC4Q6P4E1 433 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 FOXR2Q6PJQ5 311 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 BNC2Q6ZN30 1099 aaPredicted RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 CHSY1Q86X52 802 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 MCF2L2Q86YR7 1114 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 NAT16Q8N8M0 369 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 ADCY4Q8NFM4 1077 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 SUN5Q8TC36 379 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 PIWIL2Q8TC59 973 aaKnown RBP15.1■□□□□ 0.01
PTPRA-201ENST00000216877 TIMM22Q9Y584 194 aa15.1■□□□□ 0.01
PTPRA-201ENST00000216877 TCRBV7S3A2A0A539 114 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 TCRBV9S1A1TA0A576 114 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 MGEA5O60502 916 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 BSPRYQ5W0U4 402 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 SPOPLQ6IQ16 392 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 ZC3H7AQ8IWR0 971 aaKnown RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 FAM71DQ8N9W8 422 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 TFB1MQ8WVM0 346 aaKnown RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 SYT11Q9BT88 431 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 A0A087WXM4 84 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 WDR64B1ANS9 1081 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 CD48P09326 243 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 YAP1P46937 504 aaKnown RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 TRPC3Q13507 836 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 SLC15A2Q16348 729 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 PHKG1Q16816 387 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 PRR23CQ6ZRP0 262 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 GPR180Q86V85 440 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 LZTR1Q8N653 840 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 GIMAP4Q9NUV9 329 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 AKAP10O43572 662 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 LDHBP07195 334 aaKnown RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 RAD23AP54725 363 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 HADHBP55084 474 aaKnown RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 APOFQ13790 326 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 NKX1-1Q15270 411 aaPredicted RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 CEP55Q53EZ4 464 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 LILRA2Q8N149 483 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 PDCD6IPQ8WUM4 868 aaKnown RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 LENG8Q96PV6 779 aaPredicted RBP15.09■□□□□ 0.01
PTPRA-201ENST00000216877 C1orf21Q9H246 121 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 AASDHPPTQ9NRN7 309 aa15.09■□□□□ 0.01
PTPRA-201ENST00000216877 MFN2O95140 757 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 CPA3P15088 417 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 SLC1A6P48664 564 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 C12orf60Q5U649 245 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 BPIFB6Q8NFQ5 453 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 ZNF384Q8TF68 577 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 LRTOMTQ8WZ04 291 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 NAP1L4Q99733 375 aaKnown RBP15.08■□□□□ 0.01
PTPRA-201ENST00000216877 HIPK3Q9H422 1215 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 EPS8L2Q9H6S3 715 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 PLEKHA5Q9HAU0 1116 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 AURKCQ9UQB9 309 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 RNF11Q9Y3C5 154 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 SRCAPQ6ZRS2 3230 aa15.08■□□□□ 0.01
PTPRA-201ENST00000216877 DDX39AO00148 427 aaKnown RBP15.08■□□□□ 0
PTPRA-201ENST00000216877 EML1O00423 815 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 MAP3K6O95382 1288 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 FAM86B2P0C5J1 330 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 RNASEH2BQ5TBB1 312 aaKnown RBP15.08■□□□□ 0
PTPRA-201ENST00000216877 BORAQ6PGQ7 559 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 LAYNQ6UX15 382 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 PPIL6Q8IXY8 311 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0
PTPRA-201ENST00000216877 SLC4A5Q9BY07 1137 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 C17orf75Q9HAS0 396 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 PNPLA3Q9NST1 481 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 THAP1Q9NVV9 213 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 ARIH1Q9Y4X5 557 aaPredicted RBP15.08■□□□□ 0
PTPRA-201ENST00000216877 SDR42E2A6NKP2 422 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 PLOD2O00469 737 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 TCF4P15884 667 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 AOC1P19801 751 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 GRK2P25098 689 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 ATICP31939 592 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 ETV4P43268 484 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 MRPS15P82914 257 aaKnown RBP15.08■□□□□ 0
PTPRA-201ENST00000216877 KRT76Q01546 638 aa15.08■□□□□ 0
PTPRA-201ENST00000216877 KCNT2Q6UVM3 1135 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms