RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DGKIO75912 1065 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 PM20D1Q6GTS8 502 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 C3orf62Q6ZUJ4 267 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 HASPINQ8TF76 798 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 DMAP1Q9NPF5 467 aaPredicted RBP30.74■■■□□ 2.51
PABPN1-201ENST00000216727 FRMPD3Q5JV73 1810 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 SYNJ2BP-COX16A0A087WUM0 186 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 A0A1W2PQ45 241 aaPredicted RBP30.74■■■□□ 2.51
PABPN1-201ENST00000216727 A0A1W2PQY0 241 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 SSTR1P30872 391 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 ADRA1BP35368 520 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 FAM189BP81408 668 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 TMED2Q15363 201 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 CAPN12Q6ZSI9 719 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 PALM2Q8IXS6 379 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 OR10T2Q8NGX3 314 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 ACSS3Q9H6R3 686 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 COX16Q9P0S2 106 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 GGA2Q9UJY4 613 aa30.74■■■□□ 2.51
PABPN1-201ENST00000216727 POC1B-GALNT4F8VUJ3 575 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 INHAP05111 366 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 ITGB1P05556 798 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 NCAM1P13591 858 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 ATP2A2P16615 1042 aaKnown RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 GEMIN4P57678 1058 aaKnown RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 TRABD2AQ86V40 505 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 CCDC110Q8TBZ0 833 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 RHOBTB2Q9BYZ6 727 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 FAM107BQ9H098 131 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 TEX264Q9Y6I9 313 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 COL4A4P53420 1690 aaPredicted RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 RASA4BC9J798 803 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 RASA4O43374 803 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 F9P00740 461 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 BDNFP23560 247 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 KLHL38Q2WGJ6 581 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 HEATR6Q6AI08 1181 aaKnown RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 SRRM1Q8IYB3 904 aaKnown RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 MCUQ8NE86 351 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 TFB1MQ8WVM0 346 aaKnown RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 PRMT1Q99873 361 aaKnown RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 HMX1Q9NP08 348 aaPredicted RBP30.73■■■□□ 2.51
PABPN1-201ENST00000216727 STARD7Q9NQZ5 370 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 TMLHEQ9NVH6 421 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 SENP1Q9P0U3 644 aa30.73■■■□□ 2.51
PABPN1-201ENST00000216727 DSC1Q08554 894 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 DPYSQ14117 519 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 SRLQ86TD4 932 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 ETNK1Q9HBU6 452 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 TMPRSS4Q9NRS4 437 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 PSMC3IPQ9P2W1 217 aaPredicted RBP30.72■■■□□ 2.51
PABPN1-201ENST00000216727 FBXW11Q9UKB1 542 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 PCDHB8Q9UN66 801 aa30.72■■■□□ 2.51
PABPN1-201ENST00000216727 FOXO6A8MYZ6 492 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 DRD4P21917 467 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 YY1P25490 414 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 ELK3P41970 407 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 TSPY1Q01534 308 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 LRRTM3Q86VH5 581 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 VPS52Q8N1B4 723 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 LINC01599Q8WXQ3 324 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 DHRS4Q9BTZ2 278 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 KCNK9Q9NPC2 374 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 MFHAS1Q9Y4C4 1052 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 SPAG6O75602 509 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 PAFAH1B3Q15102 231 aaKnown RBP30.71■■■□□ 2.51
PABPN1-201ENST00000216727 SLAIN1Q8ND83 568 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 HTR3CQ8WXA8 447 aa30.71■■■□□ 2.51
PABPN1-201ENST00000216727 MFSD11O43934 449 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 SEMA3BQ13214 749 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 RFX8Q6ZV50 586 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 BEND5Q7L4P6 421 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 FBF1Q8TES7 1133 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 LRRN4Q8WUT4 740 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 CHMP2BQ9UQN3 213 aa30.7■■■□□ 2.51
PABPN1-201ENST00000216727 RRP15Q9Y3B9 282 aaKnown RBP30.7■■■□□ 2.51
PABPN1-201ENST00000216727 TMEM189-UBE2V1I3L0A0 370 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 EEF2KO00418 725 aaKnown RBP30.69■■■□□ 2.5
PABPN1-201ENST00000216727 TPSB2P20231 275 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 HCAR3P49019 387 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 TPSAB1Q15661 275 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 CLLU1OSQ5K130 101 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 CPLX4Q7Z7G2 160 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 IGDCC3Q8IVU1 814 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 ADAM32Q8TC27 787 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 TMEM209Q96SK2 561 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 TRIM62Q9BVG3 475 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 FTHL17Q9BXU8 183 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 DDIT4Q9NX09 232 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 CREB3O43889 395 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 APRTP07741 180 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 MPP2Q14168 576 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 QPCTQ16769 361 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 ARL13BQ3SXY8 428 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 NOMO2Q5JPE7 1267 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 MICALCLQ6ZW33 695 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 URGCPQ8TCY9 931 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 COLEC11Q9BWP8 271 aa30.69■■■□□ 2.5
PABPN1-201ENST00000216727 ATXN2Q99700 1313 aaKnown RBP30.69■■■□□ 2.5
PABPN1-201ENST00000216727 PTPRDP23468 1912 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms