RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ARHGEF38Q9NXL2 777 aa16.56■□□□□ 0.24
SNRPD3-201ENST00000215829 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNRPD3-201ENST00000215829 TLR6Q9Y2C9 796 aa16.56■□□□□ 0.24
SNRPD3-201ENST00000215829 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
SNRPD3-201ENST00000215829 I6L893 689 aaPredicted RBP16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 CCR1P32246 355 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 NNTQ13423 1086 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 PPP2R5DQ14738 602 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 ERCC6LQ2NKX8 1250 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 PPP6R3Q5H9R7 873 aaPredicted RBP16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 PPM1LQ5SGD2 360 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 HECTD3Q5T447 861 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 PYROXD2Q8N2H3 581 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 TSC1Q92574 1164 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 ZNF670Q9BS34 389 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 MAK16Q9BXY0 300 aaKnown RBP16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 MARCH2Q9P0N8 246 aa16.55■□□□□ 0.24
SNRPD3-201ENST00000215829 UQCRHLA0A096LP55 91 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 F11P03951 625 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 UQCRHP07919 91 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 ATP5C1P36542 298 aaKnown RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 RGS19P49795 217 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 TUBP50607 506 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 CYP1B1Q16678 543 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 ANKRD20A8PQ5CZ79 823 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 TMEM150AQ86TG1 271 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 ELMOD1Q8N336 334 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 HDAC7Q8WUI4 952 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 FAF2Q96CS3 445 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 SLC39A13Q96H72 371 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 RNF157Q96PX1 679 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 KRT12Q99456 494 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 ZNF334Q9HCZ1 680 aaPredicted RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 MAN1C1Q9NR34 630 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 RCOR3Q9P2K3 495 aaPredicted RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 KCNU1A8MYU2 1149 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 PER2O15055 1255 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 CST8O60676 142 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 PHF2O75151 1096 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 ZMYND10O75800 440 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 SLC2A3P11169 496 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 EPCAMP16422 314 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 TBX4P57082 545 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 BBS12Q6ZW61 710 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 RFX6Q8HWS3 928 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 C12orf50Q8NA57 414 aaPredicted RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 GDPD5Q8WTR4 605 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 MAGOHBQ96A72 148 aaKnown RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 TIFAQ96CG3 184 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 HAPLN3Q96S86 360 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 LRRC3Q9BY71 257 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 DDX47Q9H0S4 455 aaKnown RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 LRRC19Q9H756 370 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 IL21Q9HBE4 155 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 HOMER3Q9NSC5 361 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 CWC15Q9P013 229 aaKnown RBP16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 DPP7Q9UHL4 492 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 RASAL2Q9UJF2 1139 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 DNMT3LQ9UJW3 386 aa16.54■□□□□ 0.24
SNRPD3-201ENST00000215829 MYO7AQ13402 2215 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 EPOPA6NHQ4 379 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 HOXA9P31269 272 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 CHRNA3P32297 505 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 ARL4AP40617 200 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 KPNA1P52294 538 aaPredicted RBP16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 SMAD3P84022 425 aaKnown RBP16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 TFDP2Q14188 446 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 GLE1Q53GS7 698 aaKnown RBP16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 MIB1Q86YT6 1006 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 PCDH19Q8TAB3 1148 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 FCRL2Q96LA5 508 aaPredicted RBP16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 LRRC1Q9BTT6 524 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 OSBPL2Q9H1P3 480 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 SLITRK6Q9H5Y7 841 aa16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 R3HDM2Q9Y2K5 976 aaKnown RBP16.53■□□□□ 0.24
SNRPD3-201ENST00000215829 SLC12A8A0AV02 714 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 CCL16O15467 120 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 COCHO43405 550 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 SEMA3BQ13214 749 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 CCNG2Q16589 344 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 ADGRD2Q7Z7M1 963 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 RBM23Q86U06 439 aaKnown RBP16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 TMC8Q8IU68 726 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 PQLC3Q8N755 202 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 C1orf54Q8WWF1 131 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 CSPG4P5Q96PW8 444 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 DCLK3Q9C098 648 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 NACA2Q9H009 215 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 PRO3102Q9H379 93 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 OR12D3Q9UGF7 316 aa16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 HBS1LQ9Y450 684 aaKnown RBP16.52■□□□□ 0.24
SNRPD3-201ENST00000215829 HCFC2Q9Y5Z7 792 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms