RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 SF3B1O75533 1304 aaKnown RBP eCLIP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 KLRG2A4D1S0 409 aaPredicted RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 F8W8V4 182 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 PITPNM1O00562 1244 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 TPP1O14773 563 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 B4GALT5O43286 388 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 HCRTO43612 131 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ITGA2BP08514 1039 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 VCANP13611 3396 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 PTPN1P18031 435 aaKnown RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 IL4RP24394 825 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 DPP6P42658 865 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ASPAP45381 313 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 IDH3AP50213 366 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 MYBPC1Q00872 1141 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ROR1Q01973 937 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 GBE1Q04446 702 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ITGA7Q13683 1181 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 EMC2Q15006 297 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 STRIP1Q5VSL9 837 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 PRAMEF18Q5VWM3 479 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 MBLAC2Q68D91 279 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 STYK1Q6J9G0 422 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ENOSF1Q7L5Y1 443 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 AMIGO2Q86SJ2 522 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 CRLF3Q8IUI8 442 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 THNSL1Q8IYQ7 743 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 PLD6Q8N2A8 252 aaKnown RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 UBR7Q8N806 425 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ZSCAN18Q8TBC5 510 aaPredicted RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 CHURC1Q8WUH1 139 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 HSPBAP1Q96EW2 488 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 HIC2Q96JB3 615 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 OR52B2Q96RD2 323 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 PRPF18Q99633 342 aaKnown RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 TCHPQ9BT92 498 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 FOXP3Q9BZS1 431 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 CXCL16Q9H2A7 254 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 CAB39LQ9H9S4 337 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 ZNF277Q9NRM2 450 aaPredicted RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 BTBD7Q9P203 1132 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 GMPR2Q9P2T1 348 aaKnown RBP6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 PCDHA10Q9Y5I2 948 aa6.03□□□□□ -1.44
CEACAM1-201ENST00000161559 WDR27A2RRH5 827 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 GOLGA8TH3BQL2 631 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 H3BSA7 217 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 K7ERI5 159 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 AIM2O14862 343 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 MCF2LO15068 1137 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ADCY3O60266 1144 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 HNRNPCL1O60812 293 aaKnown RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ATG7O95352 703 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ASS1P00966 412 aaKnown RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 SERPINA6P08185 405 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 SNRPAP09012 282 aaKnown RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 TFPTP0C1Z6 253 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PABPC4LP0CB38 370 aaKnown RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 SRGAP2CP0DJJ0 459 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 IRF9Q00978 393 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 MS4A2Q01362 244 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PDE1CQ14123 709 aaPredicted RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PCLAFQ15004 111 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 NRF1Q16656 503 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 GSTA3Q16772 222 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 TMCO4Q5TGY1 634 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 IL31Q6EBC2 164 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 TRIM50Q86XT4 487 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 XYLT1Q86Y38 959 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ST13P4Q8IZP2 240 aaPredicted RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PLD5Q8N7P1 536 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ZNF781Q8N8C0 355 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PPP1R14CQ8TAE6 165 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ATG4CQ96DT6 458 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 C7orf26Q96N11 449 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 CENPKQ9BS16 269 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 FAM192AQ9GZU8 254 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 WWP1Q9H0M0 922 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 SEMA6AQ9H2E6 1030 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 COPS7BQ9H9Q2 264 aaPredicted RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 TMEM216Q9P0N5 145 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 APOC4-APOC2K7ER74 178 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ZNF195O14628 629 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 CFLARO15519 480 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 DNAJA2O60884 412 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 USP12O75317 370 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 LYPLA2O95372 231 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 APOC2P02655 101 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 KCNA2P16389 499 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 XRCC1P18887 633 aaPredicted RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 CYP3A5P20815 502 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 GARTP22102 1010 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 SLC5A2P31639 672 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 SLC1A6P48664 564 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ACTR2P61160 394 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 ITGA9Q13797 1035 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PIGHQ14442 188 aaPredicted RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 FAM102AQ5T9C2 384 aaPredicted RBP6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 CASC4Q6P4E1 433 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 EEPD1Q7L9B9 569 aa6.02□□□□□ -1.45
CEACAM1-201ENST00000161559 PODNQ7Z5L7 613 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms