RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 ECT2Q9H8V3 914 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 PIGVQ9NUD9 493 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 WDR35Q9P2L0 1181 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
SYPL1-201ENST00000011473 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 NCOR1O75376 2440 aa12.54□□□□□ -0.4
SYPL1-201ENST00000011473 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SOWAHDA6NJG2 315 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 DLL1O00548 723 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 ALADP13716 330 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SCNN1AP37088 669 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 HARS2P49590 506 aaKnown RBP12.53□□□□□ -0.4
SYPL1-201ENST00000011473 KPNA1P52294 538 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-201ENST00000011473 PFKPQ01813 784 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SIGLEC14Q08ET2 396 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SLC44A4Q53GD3 710 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 TXNDC11Q6PKC3 985 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 PLD4Q96BZ4 506 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 NPY6RQ99463 290 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
SYPL1-201ENST00000011473 ARHGEF3Q9NR81 526 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 TMPRSS4Q9NRS4 437 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 PLK2Q9NYY3 685 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 TLR6Q9Y2C9 796 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 HBS1LQ9Y450 684 aaKnown RBP12.53□□□□□ -0.4
SYPL1-201ENST00000011473 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 C2CD4BA6NLJ0 364 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SIGLEC16A6NMB1 481 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 IGLV3-27P01718 113 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 CYP17A1P05093 508 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 GGCXP38435 758 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 GSCP56915 257 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-201ENST00000011473 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
SYPL1-201ENST00000011473 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SLC25A52Q3SY17 297 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 CCDC14Q49A88 953 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 PPP1R15BQ5SWA1 713 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 RHBDF2Q6PJF5 856 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 TRIM67Q6ZTA4 783 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 ATP2A3Q93084 1043 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 RNF34Q969K3 372 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 ARHGEF26Q96DR7 871 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SLC39A13Q96H72 371 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 STAP1Q9ULZ2 295 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 NENFQ9UMX5 172 aa12.53□□□□□ -0.4
SYPL1-201ENST00000011473 SHISA7A6NL88 538 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 GALCP54803 685 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 OGDHQ02218 1023 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 DHCR24Q15392 516 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 ANO4Q32M45 955 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 PLEKHA7Q6IQ23 1121 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 DCUN1D2Q6PH85 259 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.52□□□□□ -0.4
SYPL1-201ENST00000011473 NAT16Q8N8M0 369 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 DNASE1L2Q92874 299 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 NT5C3BQ969T7 300 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 PARVAQ9NVD7 372 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 WNT16Q9UBV4 365 aa12.52□□□□□ -0.4
SYPL1-201ENST00000011473 USP34Q70CQ2 3546 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 I6L893 689 aaPredicted RBP12.52□□□□□ -0.41
SYPL1-201ENST00000011473 STK25O00506 426 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 TSPAN3O60637 253 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 SDC4P31431 198 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 GJA4P35212 333 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 DEUP1Q05D60 604 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 MLF2Q15773 248 aaPredicted RBP12.52□□□□□ -0.41
SYPL1-201ENST00000011473 RFWD3Q6PCD5 774 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 FAM131BQ86XD5 332 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 FLCNQ8NFG4 579 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 BTBD6Q96KE9 485 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 PANX2Q96RD6 677 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 IMPACTQ9P2X3 320 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 TFR2Q9UP52 801 aa12.52□□□□□ -0.41
SYPL1-201ENST00000011473 HELZP42694 1942 aaKnown RBP12.51□□□□□ -0.41
SYPL1-201ENST00000011473 NEDD8-MDP1E9PL57 170 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 SPECC1L-ADORA2AF8WAN1 911 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 SLC9A3R1O14745 358 aaPredicted RBP12.51□□□□□ -0.41
SYPL1-201ENST00000011473 NFATC1O95644 943 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 GPD1P21695 349 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 SLC6A4P31645 630 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 CCR1P32246 355 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 CTHP32929 405 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 SGSHP51688 502 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 RING1Q06587 406 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 DAB2IPQ5VWQ8 1189 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
SYPL1-201ENST00000011473 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms