RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ccdc57Q6PHN1 1016 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Fam185aQ7TPD2 378 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Gpr142Q7TQN9 365 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Bank1Q80VH0 783 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 4930548H24RikQ9D496 437 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Nxnl2Q9D531 156 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Map3k14Q9WUL6 942 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Sept5Q9Z2Q6 369 aa21.97■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Samd15F6XZJ7 620 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Gm8334F7CD45 553 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 P01631 113 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Atf2P16951 487 aaKnown RBP21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Ccnb1P24860 430 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Eif3eP60229 445 aaKnown RBP21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Arl4aP61213 200 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Msx3P70354 204 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Pde1bQ01065 535 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Acsbg2Q2XU92 667 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Znf583Q3V080 568 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 2700097O09RikQ6PGK3 301 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Ostm1Q8BGT0 338 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Dupd1Q8BK84 215 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Fam53cQ8BXQ8 393 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 DrgxQ8BYH0 263 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Samd3Q8C4H2 520 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Hars2Q99KK9 505 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Trem2Q99NH8 227 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Trmt11Q9CWH5 460 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 Scn5aQ9JJV9 2019 aa21.96■■□□□ 1.11
Ccdc88a-202ENSMUST00000109477 C7D3YXF5 845 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Zc3h12bG3X9I7 835 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Dcpp3L7N259 170 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 AmhP27106 555 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Atp8a1P70704 1164 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Sec1P97353 368 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Adcy8P97490 1249 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Nsun2Q1HFZ0 757 aaKnown RBP21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rnf10Q3UIW5 804 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Pld5Q3UNN8 536 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 B020004J07RikQ3UTC0 476 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ubn1Q4G0F8 1135 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Fbxw11Q5SRY7 542 aaKnown RBP21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ccdc92bQ5SUE3 299 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Iars2Q8BIJ6 1012 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Mfsd14bQ8CIA9 507 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 FgbQ8K0E8 481 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Traf3ip2Q8N7N6 555 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ddx1Q91VR5 740 aaKnown RBP21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Akr1c14Q91WT7 323 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rnf112Q96DY5 654 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Pex6Q99LC9 981 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 SncaipQ99ME3 962 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Spg21Q9CQC8 308 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 ArpinQ9D0A3 226 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Dydc1Q9D9T0 175 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Htra2Q9JIY5 458 aa21.95■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gm4924A0A1B0GR71 966 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Lcn6A2AJB9 181 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Skint6A7XUZ6 1240 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Spata31E9QAF0 1014 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gm3642K7N6V4 267 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ess2O70279 479 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Atxn1lP0C7T6 687 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ptpn22P29352 802 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Nrg1Q6DR99 700 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Tas2r115Q7M719 310 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Proser3Q7TSA6 634 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Pknox2Q8BG99 474 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ccdc134Q8C7V8 229 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Fbxw7Q8VBV4 629 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rsph1Q8VIG3 301 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Lgals2Q9CQW5 130 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rin2Q9D684 903 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Sgf29Q9DA08 293 aaKnown RBP21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rmdn1Q9DCV4 305 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ddx21Q9JIK5 851 aaKnown RBP21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Il17rbQ9JIP3 499 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Sgk1Q9WVC6 431 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Cog1Q9Z160 980 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Slc23a1Q9Z2J0 605 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ccnyl1D3YUJ3 367 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ces1bD3Z5G7 567 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Vmn2r11E9Q4X4 861 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Kifc3O35231 824 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rpl10aP53026 217 aaKnown RBP21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Usp46P62069 366 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 TceancQ3US16 359 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Vps41Q5KU39 853 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Prrt3Q6PE13 971 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 RbakQ8BQC8 711 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Efcab8Q8C9R9 203 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 TrabdQ99JY4 376 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Rpl17Q9CPR4 184 aaKnown RBP21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Zcchc8Q9CYA6 709 aaKnown RBP21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Dcp2Q9CYC6 422 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 DmgdhQ9DBT9 869 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Serpina1fQ9DCQ7 411 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 NckipsdQ9ESJ4 714 aa21.94■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Ighv11-2A0A075B5R8 117 aa21.93■■□□□ 1.1
Ccdc88a-202ENSMUST00000109477 Gm7995L7N2E4 160 aa21.93■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms