RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Paqr9Q6TCG2 375 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Olfr1415Q7TQS4 311 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Dupd1Q8BK84 215 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gcfc2Q8BKT3 769 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ttc24Q8BYG0 334 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tp53inp2Q8CFU8 221 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Olfr1416Q8VGU4 312 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pomgnt1Q91X88 660 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Pdxdc1Q99K01 787 aaKnown RBP23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Rgs19Q9CX84 216 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 MefvQ9JJ26 767 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Cog8Q9JJA2 640 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Man1b1A2AJ15 658 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Lonrf1D3YY23 762 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gm3460E9QAI8 215 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Acot1O55137 419 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Gas2P11862 314 aaKnown RBP23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Msx3P70354 204 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 VcpQ01853 806 aaKnown RBP23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Krt80Q0VBK2 452 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Rnf10Q3UIW5 804 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Papss1Q60967 624 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Dnajc1Q61712 552 aaKnown RBP23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Dpysl3Q62188 570 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Csnk1g1Q8BTH8 459 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Fndc3aQ8BX90 1198 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Tsc1Q9EP53 1161 aa23.52■■□□□ 1.36
Scn1b-201ENSMUST00000098548 Ccdc170D3YXL0 722 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 KlO35082 1014 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Il27raO70394 623 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 AdprhP54923 362 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fam171bQ14CH0 825 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Adad1Q5SUE7 619 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 LpoQ5SW46 710 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tcf4Q60722 670 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Zswim6Q80TB7 1207 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Trub1Q8C0D0 338 aaKnown RBP23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Trim61Q8JZK6 461 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Dennd1aQ8K382 1016 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Prb1Q91X93 504 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pcdha10Q91Y20 946 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Mrpl9Q99N94 265 aaKnown RBP23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Raver1Q9CW46 748 aaKnown RBP23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Slc40a1Q9JHI9 570 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fzd2Q9JIP6 570 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pla2g2fQ9QZT4 168 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 TfgQ9Z1A1 397 aa23.51■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ssxb9A2BI93 185 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Zfp651E9PZ11 729 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ncf2O70145 525 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 InscQ3HNM7 579 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Dab2ipQ3UHC7 1189 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tmprss11aQ3UQ41 389 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fbxw11Q5SRY7 542 aaKnown RBP23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Slc41a2Q8BYR8 573 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Dus1lQ8C2P3 475 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Lsm14bQ8CGC4 385 aaKnown RBP23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Slc35f5Q8R314 524 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Synpo2Q91YE8 1087 aaKnown RBP23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Scamp5Q9JKD3 235 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 NumbQ9QZS3 653 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ggt5Q9Z2A9 573 aa23.5■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Gdap1O88741 358 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Rab20P35295 233 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fam172aQ3TNH5 417 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Znf185Q62394 352 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Atl2Q6PA06 583 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Fbxo2Q80UW2 297 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ccdc181Q80ZU5 509 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Cnot10Q8BH15 744 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 CtbsQ8R242 366 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Igsf8Q8R366 611 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Prpsap2Q8R574 369 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Dhx58Q99J87 678 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 St13Q99L47 371 aaKnown RBP23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Q9D4A5 307 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tmem59Q9QY73 323 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Adam17Q9Z0F8 827 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Smarcb1Q9Z0H3 385 aa23.49■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Gm12695A2AGB2 545 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 PtproE9Q612 1226 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Pcdh9F8VPK8 1237 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Gm7694J3QNH8 270 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Serpinb9O08797 374 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Dmp1O55188 503 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Ap2a2P17427 938 aaKnown RBP23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Glb1P23780 647 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Tmem169Q8BG50 297 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Znf365Q8BG89 408 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Susd6Q8BGE4 302 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Smtnl2Q8CI12 456 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Npffr2Q924H0 417 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Trem2Q99NH8 227 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Wdr83Q9DAJ4 315 aaKnown RBP23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Slc25a19Q9DAM5 318 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Nkx2-4Q9EQM3 354 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Caln1Q9JJG7 219 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 Piwil1Q9JMB7 862 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 C87414E9PWI7 475 aa23.48■■□□□ 1.35
Scn1b-201ENSMUST00000098548 AlpiF8VPQ6 554 aa23.48■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms