RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Tmem237Q3V0J1 427 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 HnrnpdQ60668 355 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Phlda1Q62392 405 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 ChpfQ6IQX7 774 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ccnt2Q7TQK0 723 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Aldh5a1Q8BWF0 523 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ldlrap1Q8C142 308 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 HpdlQ8K248 371 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Champ1Q8K327 802 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Defb19Q8K3I8 83 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 PrccQ9EQC8 491 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ripk3Q9QZL0 486 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Fam81bA0A140LI28 432 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Cyp2t4E9PWV0 503 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Hes2O54792 157 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Trim43bP86448 445 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Sp140Q6NSQ5 534 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Tmc8Q7TN58 722 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Mib1Q80SY4 1006 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Klhl29Q80T74 875 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Tmem209Q8BRG8 561 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Rsl1d1Q8BVY0 452 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Tada2aQ8CHV6 443 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ago3Q8CJF9 860 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 GneQ91WG8 722 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Oxct1Q9D0K2 520 aaKnown RBP12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 MceeQ9D1I5 178 aa12.16□□□□□ -0.46
Trim35-201ENSMUST00000022623 Tbc1d16A2ABG4 766 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ccdc144bE9PVZ3 520 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 PtproE9Q612 1226 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Dusp8O09112 663 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Cyp2j6O54750 501 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Klc1O88447 541 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 TktP40142 623 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Nat3P50296 290 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Npas2P97460 816 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Cntnap5bQ0V8T8 1292 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Nek10Q3UGM2 1111 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ntan1Q64311 310 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Rpa1Q8VEE4 623 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Psmd9Q9CR00 222 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Thg1lQ9CY52 298 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Srfbp1Q9CZ91 441 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Gsdmdc1Q9D8T2 487 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Trpc4Q9QUQ5 974 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Maged1Q9QYH6 775 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Magel2Q9QZ04 1284 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Rnf25Q9QZR0 456 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Serpinb6cW4VSP4 379 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Megf6Q80V70 1572 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Myo18aQ9JMH9 2050 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Prpmp5E9PXN1 296 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Spin2fJ3QPU0 254 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Anxa8O35640 327 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Frg1P97376 258 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Trmt1Q3TX08 663 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 TraddQ3U0V2 310 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Prkaa1Q5EG47 559 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Dusp11Q6NXK5 321 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 DgkqQ6P5E8 934 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Usp6nlQ80XC3 819 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Ccdc68Q8BVC4 333 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Kank2Q8BX02 843 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Trib2Q8K4K3 343 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Afg3l1Q920A7 789 aaKnown RBP12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Acbd6Q9D061 282 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Tmem86aQ9D8N3 241 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Htra2Q9JIY5 458 aa12.15□□□□□ -0.46
Trim35-201ENSMUST00000022623 Bclaf3A2AG58 752 aaKnown RBP12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Skint7A7XV04 395 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 GlrbP48168 496 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Slc11a2P49282 568 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Cyp2c38P56655 490 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Sema3cQ62181 751 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Slc26a2Q62273 739 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Syn2Q64332 586 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Slc45a1Q8BIV7 751 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Eif2aQ8BJW6 581 aaKnown RBP12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Clec1aQ8BWY2 269 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 PygbQ8CI94 843 aaKnown RBP12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Cyp2c50Q91X77 490 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 ChiaQ91XA9 473 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 DarsQ922B2 501 aaKnown RBP12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Rrp15Q9CYX7 281 aaKnown RBP12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Jph2Q9ET78 696 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Fbxo17Q9QZM8 286 aa12.15□□□□□ -0.47
Trim35-201ENSMUST00000022623 Gm29554A0A087WNW4 188 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Gm12800B1AUV4 484 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Gm12794L7MTS5 483 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Slc10a3P21129 473 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Hoxa2P31245 372 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Rnf180Q3U827 592 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Ag2Q3UPL5 249 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Cyp2c66Q5GLZ0 490 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Zswim5Q80TC6 1188 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Dcun1d2Q8BZJ7 259 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Fbxl5Q8C2S5 690 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Ppp4r1Q8K2V1 951 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Olfr615Q8VGY4 313 aa12.14□□□□□ -0.47
Trim35-201ENSMUST00000022623 Nme5Q99MH5 211 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms