RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 ChiaQ91XA9 473 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Chst12Q99LL3 419 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Adgrf4Q9D2L6 698 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Spata9Q9D9R3 252 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Tnfrsf10bQ9QZM4 381 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 St6galnac4Q9R2B6 360 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pdpk1Q9Z2A0 559 aa19.33■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Gm20721E9Q2U8 318 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pdzd7E9Q9W7 1021 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Axin1O35625 863 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Psma2P49722 234 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Neurog2P70447 263 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 PrkcqQ02111 707 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pdcd1Q02242 288 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Mcm9Q2KHI9 1134 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Zdhhc17Q80TN5 632 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Thnsl1Q8BH55 747 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Hspbap1Q8BK58 483 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Trip10Q8CJ53 603 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Prpf39Q8K2Z2 665 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Itgbl1Q8VDV0 494 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Homer3Q99JP6 356 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Mrps17Q9CQE3 120 aaKnown RBP19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Acbd6Q9D061 282 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Actrt2Q9D9L5 377 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Tubb3Q9ERD7 450 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 PtproE9Q612 1226 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Fam71e2L7N480 754 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Sept7O55131 436 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Otud5Q3U2S4 566 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Icam5Q60625 917 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Bnip1Q6QD59 228 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Prl3a1Q78Y73 227 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Baiap2l2Q80Y61 522 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Abhd8Q8R0P8 439 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Usp3Q91W36 520 aaKnown RBP19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Ophn1Q99J31 802 aa19.32■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Thsd7bQ6P4U0 1607 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Cyp2a22B2RXZ2 492 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Gm1141B9EJU1 475 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Maml3D4QGC2 1135 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Krt90E9Q1Z0 538 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pim1P06803 397 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 TktP40142 623 aaKnown RBP19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Scg3P47867 471 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Sparcl1P70663 650 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Fam91a1Q3UVG3 837 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Tab3Q571K4 716 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 B3gnt3Q5JCS9 372 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Htr1aQ64264 421 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Fndc3bQ6NWW9 1207 aaKnown RBP19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Trim14Q8BVW3 440 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Agbl2Q8CDK2 862 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Lpin1Q91ZP3 924 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pex6Q99LC9 981 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pkp2Q9CQ73 795 aaKnown RBP19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Fam90a1bQ9D4F3 419 aa19.31■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Mindy4b-psA0A1W2P7H6 457 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Celf5D3Z4T1 395 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Zfp850J3QPC5 689 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Lamp1P11438 406 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Glud1P26443 558 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Tbxas1P36423 533 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Rpl10aP53026 217 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 ProcrQ64695 242 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Scube3Q66PY1 993 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Ccdc154Q6RUT8 657 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Slc15a5Q8CBB2 566 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Pacs1Q8K212 961 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Actr3Q99JY9 418 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Zmat2Q9CPW7 199 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Nudt8Q9CR24 210 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 AenQ9CZI9 336 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Noxred1Q9D3S5 366 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Lima1Q9ERG0 753 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Sh2d3cQ9QZS8 854 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Akap1O08715 857 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 NoctO35710 429 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Cbfa2t2O70374 594 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Morf4l1P60762 362 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Thumpd3P97770 505 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Lrrn4clQ3TYX2 239 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Nek10Q3UGM2 1111 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Otol1Q4ZJM7 482 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Xkr4Q5GH67 647 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Cage1Q5IR70 849 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Map3k7Q62073 579 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Gemin4Q6P6L6 1058 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Wscd1Q80XH4 572 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Fbxw21Q8BI38 468 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Map1sQ8C052 973 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Aph1bQ8C7N7 257 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Ccdc63Q8CDV6 558 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Tgif2lx2Q8K5B9 231 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Csde1Q91W50 798 aaKnown RBP19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Trim66Q924W6 1242 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Krt20Q9D312 431 aa19.3■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Olfr600E9PUN7 314 aa19.29■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 C87414E9PWI7 475 aa19.29■□□□□ 0.68
Shkbp1-201ENSMUST00000003857 Vmn2r87E9PZX4 848 aa19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms