RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 SLC20A2Q08357 652 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 MGAT5Q09328 741 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 EFHC1Q5JVL4 640 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 LVRNQ6Q4G3 990 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 CXCL17Q6UXB2 119 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 HFE2Q6ZVN8 426 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 STRADAQ7RTN6 431 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 IFNL1Q8IU54 200 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 GSTCDQ8NEC7 633 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TSPAN18Q96SJ8 248 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 GAD1Q99259 594 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 CYTH2Q99418 400 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 MED10Q9BTT4 135 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 POPDC2Q9HBU9 364 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 MIOSQ9NXC5 875 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 DTLQ9NZJ0 730 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 FZD10Q9ULW2 581 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 ST3GAL5Q9UNP4 418 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 ARL2BPQ9Y2Y0 163 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TTLL3Q9Y4R7 772 aa17.59■□□□□ 0.41
PHGDH-229ENST00000641891 TRPM7Q96QT4 1865 aa17.58■□□□□ 0.41
PHGDH-229ENST00000641891 FAM155BO75949 473 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 AKR1A1P14550 325 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 VAV1P15498 845 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 MAP3K7CLP57077 242 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 PDK4Q16654 411 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 SLC25A52Q3SY17 297 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 GDF6Q6KF10 455 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-229ENST00000641891 CLEC20AQ6ZU45 233 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 QKIQ96PU8 341 aaKnown RBP eCLIP17.58■□□□□ 0.4
PHGDH-229ENST00000641891 CRTAC1Q9NQ79 661 aa17.58■□□□□ 0.4
PHGDH-229ENST00000641891 DAB1O75553 588 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 PGK1P00558 417 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 ADRA1DP25100 572 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 MRPS5P82675 430 aaKnown RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 FAAP100Q0VG06 881 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 PTK7Q13308 1070 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 NBPF20Q3BBV1 942 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 GNASQ5JWF2 1037 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 HHATQ5VTY9 493 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 SYPL2Q5VXT5 272 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 ZNF534Q76KX8 674 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 CTU1Q7Z7A3 348 aaKnown RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 SENP8Q96LD8 212 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 TSPYL2Q9H2G4 693 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 KRT82Q9NSB4 513 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 FAM105AQ9NUU6 356 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 DDX43Q9NXZ2 648 aaKnown RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 SLC17A7Q9P2U7 560 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 ZNF638Q14966 1978 aaKnown RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 CXorf49A8MYA2 514 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 GABRDO14764 452 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 MFSD11O43934 449 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 RASSF9O75901 435 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 C1QAP02745 245 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-229ENST00000641891 MAGEA6P43360 314 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 CLCNKBP51801 687 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 TAF2Q6P1X5 1199 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 MPP5Q8N3R9 675 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 CCDC63Q8NA47 563 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 C3orf58Q8NDZ4 430 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 TCP10LQ8TDR4 215 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 SLC44A1Q8WWI5 657 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 SERAC1Q96JX3 654 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 NMRK2Q9NPI5 230 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 PHTF1Q9UMS5 762 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 TRPV2Q9Y5S1 764 aa17.57■□□□□ 0.4
PHGDH-229ENST00000641891 WDR91A4D1P6 747 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 NRP1O14786 923 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 DNAJC8O75937 253 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-229ENST00000641891 ZFXP17010 805 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-229ENST00000641891 GRIA1P42261 906 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 CACNA2D1P54289 1103 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 NME3Q13232 169 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 XRCC4Q13426 336 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 ECHDC2Q86YB7 292 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 VPS52Q8N1B4 723 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 BANPQ8N9N5 519 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 RNF169Q8NCN4 708 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 SOCS4Q8WXH5 440 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 LGMNQ99538 433 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 LRRC4Q9HBW1 653 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 SSU72Q9NP77 194 aaKnown RBP17.56■□□□□ 0.4
PHGDH-229ENST00000641891 ARHGEF4Q9NR80 690 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 TMEM30AQ9NV96 361 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 ZC3H7BQ9UGR2 993 aaKnown RBP17.56■□□□□ 0.4
PHGDH-229ENST00000641891 M0QZ92 97 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 GCATO75600 419 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 ZWINTO95229 277 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 CHRNA1P02708 482 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 GBP2P32456 591 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-229ENST00000641891 TKTL1P51854 596 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 SLC8A3P57103 927 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 CRHR2Q13324 411 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 DENND5BQ6ZUT9 1274 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 GPRIN1Q7Z2K8 1008 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 SIX6OS1Q8N1H7 587 aa17.56■□□□□ 0.4
PHGDH-229ENST00000641891 FITM2Q8N6M3 262 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms