RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SLC39A12Q504Y0 691 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 C6orf118Q5T5N4 469 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 BZW1Q7L1Q6 419 aaKnown RBP17.94■□□□□ 0.46
PHGDH-208ENST00000641023 NTAN1Q96AB6 310 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 SCLYQ96I15 445 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 PWWP2AQ96N64 755 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 TMEM109Q9BVC6 243 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 ZCWPW1Q9H0M4 648 aa17.94■□□□□ 0.46
PHGDH-208ENST00000641023 BCLAF3A2AJT9 711 aaKnown RBP17.93■□□□□ 0.46
PHGDH-208ENST00000641023 GOT1P17174 413 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 XRCC4Q13426 336 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 KYNUQ16719 465 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 BSPRYQ5W0U4 402 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 BHLHA9Q7RTU4 235 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 NPAS4Q8IUM7 802 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 PYROXD2Q8N2H3 581 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 FUBP3Q96I24 572 aaKnown RBP eCLIP17.93■□□□□ 0.46
PHGDH-208ENST00000641023 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 MAGEB5Q9BZ81 275 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 ROPN1BQ9BZX4 212 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-208ENST00000641023 ROPN1Q9HAT0 212 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-208ENST00000641023 DDIT4Q9NX09 232 aa17.93■□□□□ 0.46
PHGDH-208ENST00000641023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.46
PHGDH-208ENST00000641023 FARP1Q9Y4F1 1045 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-208ENST00000641023 A6NNZ2 444 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 H3BRJ5 948 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 OR4Q2P0C623 313 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 NR1D1P20393 614 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 ADRA1BP35368 520 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CCL23P55773 120 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 TUBB8Q3ZCM7 444 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 VARS2Q5ST30 1063 aaKnown RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CENPUQ71F23 418 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 BEND5Q7L4P6 421 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CTU1Q7Z7A3 348 aaKnown RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CEP57Q86XR8 500 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 UHMK1Q8TAS1 419 aaKnown RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 ADAM32Q8TC27 787 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 EDEM1Q92611 657 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 PRCCQ92733 491 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 KCNN4O15554 427 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CXCL10P02778 98 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 MAGEA4P43358 317 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 SLC5A3P53794 718 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 FAAP100Q0VG06 881 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 DNAJC21Q5F1R6 531 aaKnown RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 EMC10Q5UCC4 262 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 FAM171A1Q5VUB5 890 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CDKL3Q8IVW4 592 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CRIPAKQ8N1N5 446 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 ARFGAP2Q8N6H7 521 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 RNF139Q8WU17 664 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 CPT1BQ92523 772 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 PGM2Q96G03 612 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 USP29Q9HBJ7 922 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 WDR6Q9NNW5 1121 aaKnown RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 ABI2Q9NYB9 513 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-208ENST00000641023 NINJ2Q9NZG7 142 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 PAK5Q9P286 719 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 FBXW11Q9UKB1 542 aa17.92■□□□□ 0.46
PHGDH-208ENST00000641023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 TLDC2A0PJX2 215 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 CREB3O43889 395 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 CAPN2P17655 700 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 AMPD1P23109 780 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 RBL1P28749 1068 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 BASP1P80723 227 aaKnown RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 SCAPQ12770 1279 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 CTXN3Q4LDR2 81 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 NCBP2-AS2Q69YL0 99 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 VSTM1Q6UX27 236 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 KDM7AQ6ZMT4 941 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 NAT8LQ8N9F0 302 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 SCAMP5Q8TAC9 235 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 RTP4Q96DX8 246 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 TTC25Q96NG3 672 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 WDCPQ9H6R7 721 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 ABCC13Q9NSE7 274 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 NOVA2Q9UNW9 492 aaKnown RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 SF3B1O75533 1304 aaKnown RBP eCLIP17.91■□□□□ 0.463e-6■■■■■ 100.2
PHGDH-208ENST00000641023 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 RASGRF2O14827 1237 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 MAP3K6O95382 1288 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 GATMP50440 423 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 GBE1Q04446 702 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 ELAVL2Q12926 359 aaKnown RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 SKIDA1Q1XH10 827 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 UBAP2Q5T6F2 1119 aaKnown RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 ZNF280DQ6N043 979 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 B4GALNT4Q76KP1 1039 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 SCN4BQ8IWT1 228 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 C9orf72Q96LT7 481 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 TMEM175Q9BSA9 504 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 PHACTR1Q9C0D0 580 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 STMN4Q9H169 189 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-208ENST00000641023 SAYSD1Q9NPB0 183 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 ARHGEF4Q9NR80 690 aa17.91■□□□□ 0.46
PHGDH-208ENST00000641023 TBKBP1A7MCY6 615 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms