RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 POM121BA6NF01 834 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 AGPSO00116 658 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 FOXN3O00409 490 aaPredicted RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 PMM2O15305 246 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 THAP12O43422 761 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 EXOC3O60645 756 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 TJP3O95049 919 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 PRKCGP05129 697 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 ANXA2P07355 339 aaKnown RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 NHLRC4P0CG21 123 aaPredicted RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 SLC5A1P13866 664 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 TRIM27P14373 513 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 FPR3P25089 353 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 GKP32189 559 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 GNALP38405 381 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 TIRAPP58753 221 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 SUMO2P61956 95 aaKnown RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 HTRA4P83105 476 aaPredicted RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 HOXA4Q00056 320 aaPredicted RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 TFF2Q03403 129 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 KLHDC7AQ5VTJ3 777 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 MTHFD1LQ6UB35 978 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 PTF1AQ7RTS3 328 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 CCDC33Q8N5R6 958 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 SEMA6DQ8NFY4 1073 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 CYP2W1Q8TAV3 490 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 DPF1Q92782 380 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 IQCDQ96DY2 449 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 DAZAP1Q96EP5 407 aaKnown RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 TBCBQ99426 244 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 FAM83DQ9H4H8 585 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 AS3MTQ9HBK9 375 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 GEMIN8Q9NWZ8 242 aaKnown RBP3.8□□□□□ -1.8
ATM-230ENST00000640388 LPAR3Q9UBY5 353 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 AMFRQ9UKV5 643 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 NRAPQ86VF7 1730 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 CTTNBP2Q8WZ74 1663 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 BAHCC1Q9P281 2608 aa3.8□□□□□ -1.8
ATM-230ENST00000640388 NCOA3Q9Y6Q9 1424 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 CARMIL1Q5VZK9 1371 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 EXOC5O00471 708 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 FGAP02671 866 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 A1BGP04217 495 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 MYL3P08590 195 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 MYCLP12524 364 aaPredicted RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 NTSR1P30989 418 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 PRIM2P49643 509 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 ALDH5A1P51649 535 aaPredicted RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 PSG6Q00889 435 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 TIAL1Q01085 375 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATM-230ENST00000640388 SRSF4Q08170 494 aaKnown RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 ZNF543Q08ER8 600 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 GRM1Q13255 1194 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 HLTFQ14527 1009 aaKnown RBP eCLIP3.79□□□□□ -1.8
ATM-230ENST00000640388 PROSER3Q2NL68 480 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 RNASE12Q5GAN4 147 aaKnown RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 PRAMEF17Q5VTA0 474 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 GGT6Q6P531 493 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 KIRREL2Q6UWL6 708 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 TRIM72Q6ZMU5 477 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 ZNF782Q6ZMW2 699 aaPredicted RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 C11orf44Q8N8P7 122 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 TERB1Q8NA31 727 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 ATP11CQ8NB49 1132 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 PJA1Q8NG27 643 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 DDB2Q92466 427 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 LRRC46Q96FV0 321 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 HIST1H2AAQ96QV6 131 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 THAP7Q9BT49 309 aaPredicted RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 NAA15Q9BXJ9 866 aaKnown RBP3.79□□□□□ -1.8
ATM-230ENST00000640388 CIPCQ9C0C6 399 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 TFCP2L1Q9NZI6 479 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 CAPN11Q9UMQ6 739 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 HPSEQ9Y251 543 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 FRMD4BQ9Y2L6 1034 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 ADGRB3O60242 1522 aa3.79□□□□□ -1.8
ATM-230ENST00000640388 CACNA1GO43497 2377 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 PTPN23Q9H3S7 1636 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 WIPF3A6NGB9 483 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 SPRY2O43597 315 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 SNX2O60749 519 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 KRT18P05783 430 aaKnown RBP3.78□□□□□ -1.8
ATM-230ENST00000640388 PHKG2P15735 406 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 CREB1P16220 341 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 STT3AP46977 705 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 RENBPP51606 427 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 CASP5P51878 434 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 IFIT5Q13325 482 aaKnown RBP3.78□□□□□ -1.8
ATM-230ENST00000640388 COLEC12Q5KU26 742 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 MANEALQ5VSG8 457 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 MZT2AQ6P582 158 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 CLEC9AQ6UXN8 241 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 SERPINA13PQ6UXR4 307 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 PTCHD4Q6ZW05 846 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 CHSY1Q86X52 802 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 PNLDC1Q8NA58 520 aaKnown RBP3.78□□□□□ -1.8
ATM-230ENST00000640388 ZNF668Q96K58 619 aaPredicted RBP3.78□□□□□ -1.8
ATM-230ENST00000640388 MMS19Q96T76 1030 aa3.78□□□□□ -1.8
ATM-230ENST00000640388 HEYLQ9NQ87 328 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms