RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TRUB2O95900 331 aaKnown RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 KRT3P12035 628 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 NOS2P35228 1153 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 MATKP42679 507 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 COG7P83436 770 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 OTUD1Q5VV17 481 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 DNAJC24Q6P3W2 148 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 TTC8Q8TAM2 541 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 NUP210Q8TEM1 1887 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 CFAP57Q96MR6 1250 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 DDX23Q9BUQ8 820 aaKnown RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 TRIM62Q9BVG3 475 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 COL25A1Q9BXS0 654 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 PACSIN1Q9BY11 444 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 THAP2Q9H0W7 228 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 BRD9Q9H8M2 597 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 THG1LQ9NWX6 298 aaKnown RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 CALCOCO1Q9P1Z2 691 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 MYO1AQ9UBC5 1043 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 CNOT8Q9UFF9 292 aaKnown RBP13.77□□□□□ -0.21
GTF3A-209ENST00000640289 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
GTF3A-209ENST00000640289 E2F8A0AVK6 867 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 SIGLEC16A6NMB1 481 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 ARNTLO00327 626 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 ZNF263O14978 683 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 CHADO15335 359 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 IRAK2O43187 625 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 KLKB1P03952 638 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 SRFP11831 508 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 ARSAP15289 507 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 FECHP22830 423 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 RFC1P35251 1148 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 SULT1E1P49888 294 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 TBX4P57082 545 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 TNK2Q07912 1038 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 MAMLD1Q13495 774 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 TRIP4Q15650 581 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 RAB6CQ53S08 254 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 IER5LQ5T953 404 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 CC2D1AQ6P1N0 951 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 OSCP1Q8WVF1 389 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 RXFP2Q8WXD0 754 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 PLD4Q96BZ4 506 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 ARHGEF26Q96DR7 871 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 FCRL2Q96LA5 508 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 MCEEQ96PE7 176 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 TBCBQ99426 244 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 NPY6RQ99463 290 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 FAM83CQ9BQN1 747 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 RAB6CQ9H0N0 254 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 EBF3Q9H4W6 596 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 HPS4Q9NQG7 708 aa13.76□□□□□ -0.21
GTF3A-209ENST00000640289 DUS2Q9NX74 493 aaKnown RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 HBS1LQ9Y450 684 aaKnown RBP13.76□□□□□ -0.21
GTF3A-209ENST00000640289 C2CD4BA6NLJ0 364 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 GOLGA6L6A8MZA4 724 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 M0QYT0 321 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 CORO1AP31146 461 aaKnown RBP13.75□□□□□ -0.21
GTF3A-209ENST00000640289 IFNAR2P48551 515 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 ATXN1P54253 815 aaKnown RBP13.75□□□□□ -0.21
GTF3A-209ENST00000640289 GALCP54803 685 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 NME3Q13232 169 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 EIF4EBP2Q13542 120 aaPredicted RBP13.75□□□□□ -0.21
GTF3A-209ENST00000640289 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
GTF3A-209ENST00000640289 EML3Q32P44 896 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 Q6ZNB5 142 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 HTR3DQ70Z44 454 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 DENND1CQ8IV53 801 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 IRF7Q92985 503 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 NT5C3BQ969T7 300 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 SLC39A13Q96H72 371 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 SLC2A4RGQ9NR83 387 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 GTSE1Q9NYZ3 720 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 LSM7Q9UK45 103 aaKnown RBP13.75□□□□□ -0.21
GTF3A-209ENST00000640289 AGO1Q9UL18 857 aaKnown RBP13.75□□□□□ -0.21
GTF3A-209ENST00000640289 STAP1Q9ULZ2 295 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 TLR6Q9Y2C9 796 aa13.75□□□□□ -0.21
GTF3A-209ENST00000640289 ANKRD62A6NC57 917 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 OTOL1A6NHN0 477 aaPredicted RBP13.74□□□□□ -0.21
GTF3A-209ENST00000640289 DCXO43602 365 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 IGLV3-27P01718 113 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 MYBL1P10243 752 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 GPD1P21695 349 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 SDC4P31431 198 aa13.74□□□□□ -0.21
GTF3A-209ENST00000640289 GBP1P32455 592 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms