RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ZSWIM1Q9BR11 485 aa8.4□□□□□ -1.06
SCARB2-220ENST00000640076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.4□□□□□ -1.06
SCARB2-220ENST00000640076 MTIF3Q9H2K0 278 aaKnown RBP8.4□□□□□ -1.06
SCARB2-220ENST00000640076 ZNF576Q9H609 170 aa8.4□□□□□ -1.06
SCARB2-220ENST00000640076 ADAM28Q9UKQ2 775 aa8.4□□□□□ -1.06
SCARB2-220ENST00000640076 DSEQ9UL01 958 aa8.4□□□□□ -1.06
SCARB2-220ENST00000640076 NENFQ9UMX5 172 aa8.4□□□□□ -1.06
SCARB2-220ENST00000640076 REXO2Q9Y3B8 237 aaKnown RBP8.4□□□□□ -1.06
SCARB2-220ENST00000640076 TIMM13Q9Y5L4 95 aaPredicted RBP8.4□□□□□ -1.06
SCARB2-220ENST00000640076 ARHGEF37A1IGU5 675 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 NT5C1B-RDH14C9J2C7 533 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 THAP12O43422 761 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 TRAPPC3O43617 180 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 MYBL2P10244 700 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 CD19P15391 556 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ATP2A2P16615 1042 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 TYMPP19971 482 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 TNFAIP3P21580 790 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 RECQLP46063 649 aaPredicted RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 WASHC5Q12768 1159 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ACOT1Q86TX2 421 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 PALB2Q86YC2 1186 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 CRYBG2Q8N1P7 616 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ACRBPQ8NEB7 543 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 BCL7CQ8WUZ0 217 aaPredicted RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ZNF606Q8WXB4 792 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 WNT2BQ93097 391 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 HEXIM2Q96MH2 286 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 PCDHB18PQ96TA0 734 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 DPEP3Q9H4B8 488 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 NAGPAQ9UK23 515 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 KIAA1257Q9ULG3 409 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 INSL6Q9Y581 213 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 KIAA1671Q9BY89 1806 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 TNRC18O15417 2968 aaPredicted RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.074e-6■■■■■ 139.6
SCARB2-220ENST00000640076 F5H423 210 aaPredicted RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 IPO7O95373 1038 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 EFEMP2O95967 443 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 CCDC175P0C221 793 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 JMJD7P0C870 316 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 LAG3P18627 525 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 LHX1P48742 406 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 SLC7A5Q01650 507 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 SPA17Q15506 151 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 C9orf50Q5SZB4 431 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 SPOUT1Q5T280 376 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 FUT10Q6P4F1 479 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ALKBH5Q6P6C2 394 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ADGRD1Q6QNK2 874 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 KCNT2Q6UVM3 1135 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 FGD2Q7Z6J4 655 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 METTL23Q86XA0 190 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 LMNTD2Q8IXW0 634 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 NDUFAF2Q8N183 169 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 C12orf29Q8N999 325 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 OR2W6PQ8NHA6 318 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 ZNF558Q96NG5 402 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 RAD9AQ99638 391 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 RTP3Q9BQQ7 232 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 GPR62Q9BZJ7 368 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 SEPT11Q9NVA2 429 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 DDX43Q9NXZ2 648 aaKnown RBP8.39□□□□□ -1.07
SCARB2-220ENST00000640076 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
SCARB2-220ENST00000640076 A0A096LPE4 126 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 A0A1W2PPZ6 126 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 O00370 1275 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 SYN3O14994 580 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 OAZ2O95190 189 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 LTFP02788 710 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 LINC00271P0C7V0 271 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 ACPPP15309 386 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 ACAT1P24752 427 aaKnown RBP8.38□□□□□ -1.07
SCARB2-220ENST00000640076 PCSK1P29120 753 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 TKTP29401 623 aaKnown RBP8.38□□□□□ -1.07
SCARB2-220ENST00000640076 PPP2R2AP63151 447 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 KRT83P78385 493 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 YWHAHQ04917 246 aaPredicted RBP8.38□□□□□ -1.07
SCARB2-220ENST00000640076 ELAVL2Q12926 359 aaKnown RBP8.38□□□□□ -1.07
SCARB2-220ENST00000640076 SLC9A5Q14940 896 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 SGO2Q562F6 1265 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 FAM171A1Q5VUB5 890 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 OVOS1Q6IE37 1185 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 CFAP161Q6P656 301 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 SLC39A11Q8N1S5 342 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
SCARB2-220ENST00000640076 COLGALT1Q8NBJ5 622 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 B3GALNT2Q8NCR0 500 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 POF1BQ8WVV4 589 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 GOLGA1Q92805 767 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 DNAI2Q9GZS0 605 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 TAS2R14Q9NYV8 317 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 ACAD8Q9UKU7 415 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 PPP2R2CQ9Y2T4 447 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 CHD9Q3L8U1 2897 aa8.38□□□□□ -1.07
SCARB2-220ENST00000640076 USP27XA6NNY8 438 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms