RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SENP1Q9P0U3 644 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 RABGEF1Q9UJ41 708 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 FAM47DPA6NHR8 397 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 H7C0C1 242 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SNX3O60493 162 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 TFE3P19532 575 aaPredicted RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 TGM2P21980 687 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SSTR1P30872 391 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ATP5OP48047 213 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 NRLP54845 237 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ADCY1Q08828 1119 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 TUSC3Q13454 348 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 LACTB2Q53H82 288 aaPredicted RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ANKRD20A8PQ5CZ79 823 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 CLLU1OSQ5K130 101 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 C1orf228Q6PIY5 440 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 LRRC8DQ7L1W4 858 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PIGZQ86VD9 579 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PACS2Q86VP3 889 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 FAM126BQ8IXS8 530 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 NDRG1Q92597 394 aaKnown RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 MAGEB18Q96M61 343 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 WDR83Q9BRX9 315 aaKnown RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 DUSP16Q9BY84 665 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 MYBPHLA2RUH7 354 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 CCT8L1PA6NM43 557 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 APOL1O14791 398 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SKIP12755 728 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 KRT15P19012 456 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SCNN1AP37088 669 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PTPN9P43378 593 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 RPL34P49207 117 aaKnown RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 CDK7P50613 346 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SLC18A1P54219 525 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 GEMIN4P57678 1058 aaKnown RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 RNASELQ05823 741 aaKnown RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SLC20A2Q08357 652 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 GPNMBQ14956 572 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PKN2Q16513 984 aaKnown RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SPRED3Q2MJR0 410 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 NUGGCQ68CJ6 796 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SLC9A4Q6AI14 798 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 C3orf62Q6ZUJ4 267 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SLC24A5Q71RS6 500 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 SLC26A9Q7LBE3 791 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ARCQ7LC44 396 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 TMEM86AQ8N2M4 240 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PQLC3Q8N755 202 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 FBXO36Q8NEA4 188 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PCDH19Q8TAB3 1148 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 RTP3Q9BQQ7 232 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ZNF670Q9BS34 389 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 MED10Q9BTT4 135 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 C11orf84Q9BUA3 381 aaPredicted RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ADAM33Q9BZ11 813 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 USP29Q9HBJ7 922 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 CYLDQ9NQC7 956 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 KRT82Q9NSB4 513 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 FGFR1OP2Q9NVK5 253 aa15.67■□□□□ 0.1
TRIM3-215ENST00000639856 PSMC3IPQ9P2W1 217 aaPredicted RBP15.67■□□□□ 0.1
TRIM3-215ENST00000639856 ZNF487B1APH4 448 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 H0YHG0 523 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 DNM1LO00429 736 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 XPO1O14980 1071 aaKnown RBP15.66■□□□□ 0.1
TRIM3-215ENST00000639856 PRPF4O43172 522 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRIM3-215ENST00000639856 NBNO60934 754 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 OAS1P00973 400 aaKnown RBP15.66■□□□□ 0.1
TRIM3-215ENST00000639856 SELPP16109 830 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 NPR3P17342 541 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 LHX1P48742 406 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 BCAR1P56945 870 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 ADIGQ0VDE8 80 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 CA9Q16790 459 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 CLEC20AQ6ZU45 233 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 FAF2Q96CS3 445 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 PCED1BQ96HM7 432 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 TGS1Q96RS0 853 aaKnown RBP15.66■□□□□ 0.1
TRIM3-215ENST00000639856 DNAI2Q9GZS0 605 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 TRABDQ9H4I3 376 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 PAK6Q9NQU5 681 aaPredicted RBP15.66■□□□□ 0.1
TRIM3-215ENST00000639856 TMEM30AQ9NV96 361 aa15.66■□□□□ 0.1
TRIM3-215ENST00000639856 CFAP69A5D8W1 941 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 FAM163BP0C2L3 166 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 TSHRP16473 764 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 CACNA2D1P54289 1103 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 KCNJ11Q14654 390 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 BBS9Q3SYG4 887 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 ZNF280BQ86YH2 543 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 PALM2Q8IXS6 379 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 CENPIQ92674 756 aaPredicted RBP15.65■□□□□ 0.1
TRIM3-215ENST00000639856 RTP4Q96DX8 246 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 SMC6Q96SB8 1091 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 RHOBTB2Q9BYZ6 727 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 ACSS3Q9H6R3 686 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 TMEM51Q9NW97 253 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 PAK5Q9P286 719 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 HEY1Q9Y5J3 304 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 CHADO15335 359 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 KCNN4O15554 427 aa15.65■□□□□ 0.1
TRIM3-215ENST00000639856 DDHD2O94830 711 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms