RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 C16orf89Q6UX73 402 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 TFAP2DQ7Z6R9 452 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GPC2Q8N158 579 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 PCYOX1LQ8NBM8 494 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GAD1Q99259 594 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GPR63Q9BZJ6 419 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GPRC5DQ9NZD1 345 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GPR182O15218 404 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 DDX3YO15523 660 aaKnown RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 MGEA5O60502 916 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 GHRP10912 638 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 TFE3P19532 575 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 NFKBIAP25963 317 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 SERPINB8P50452 374 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 ARHGDIAP52565 204 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 HIRAP54198 1017 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 THEMIS2Q5TEJ8 643 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 PHF13Q86YI8 300 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 C12orf56Q8IXR9 622 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 JOSD2Q8TAC2 188 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 HELQQ8TDG4 1101 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 PRCCQ92733 491 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 YY1AP1Q9H869 796 aa14.85□□□□□ -0.03
SCARB2-216ENST00000639300 AAR2Q9Y312 384 aaKnown RBP14.85□□□□□ -0.03
SCARB2-216ENST00000639300 A0A0B4J269 797 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 STRNO43815 780 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 RGS2P41220 211 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 NME5P56597 212 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 BEX3Q00994 111 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 PRAMEF19Q5SWL8 479 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 PTRHD1Q6GMV3 140 aaKnown RBP14.84□□□□□ -0.03
SCARB2-216ENST00000639300 FBXO32Q969P5 355 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 PBXIP1Q96AQ6 731 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 NT5MQ9NPB1 228 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 TNFSF13BQ9Y275 285 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 MROH7Q68CQ1 1323 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 OPLAHO14841 1288 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 ESRRBO95718 433 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 CSHL1Q14406 222 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 MYLK2Q9H1R3 596 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 NRXN3Q9Y4C0 1643 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 UMODL1Q5DID0 1318 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 AGPSO00116 658 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 STX7O15400 261 aaKnown RBP14.84□□□□□ -0.03
SCARB2-216ENST00000639300 ATP6V1B1P15313 513 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 LHX1P48742 406 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 HARS2P49590 506 aaKnown RBP14.84□□□□□ -0.03
SCARB2-216ENST00000639300 BTKQ06187 659 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 ABHD15Q6UXT9 468 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 AJAP1Q9UKB5 411 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-216ENST00000639300 PKP3Q9Y446 797 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 CNTNAP2Q9UHC6 1331 aa14.84□□□□□ -0.03
SCARB2-216ENST00000639300 hCG_2014768A0A024R1R8 64 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 SYCE1LA8MT33 242 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 FOXO6A8MYZ6 492 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.03
SCARB2-216ENST00000639300 TSPAN3O60637 253 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 PYGLP06737 847 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 KRT33BQ14525 404 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 ZC3H12AQ5D1E8 599 aaKnown RBP14.83□□□□□ -0.03
SCARB2-216ENST00000639300 LRRC38Q5VT99 294 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 TUBGCP3Q96CW5 907 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 APOPT1Q96IL0 206 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 ULBP1Q9BZM6 244 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 VTA1Q9NP79 307 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 PDGFCQ9NRA1 345 aa14.83□□□□□ -0.03
SCARB2-216ENST00000639300 F8W8V4 182 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 DRD4P21917 467 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 GP5P40197 560 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 AGAP9Q5VTM2 703 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 SEL1L3Q68CR1 1132 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 PTAR1Q7Z6K3 402 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-216ENST00000639300 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 PGLYRP2Q96PD5 576 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 SNRNP25Q9BV90 132 aaKnown RBP14.83□□□□□ -0.04
SCARB2-216ENST00000639300 APOL5Q9BWW9 433 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 SPTLC1O15269 473 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 VAPBO95292 243 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 YBX3P16989 372 aaKnown RBP eCLIP14.83□□□□□ -0.04
SCARB2-216ENST00000639300 FECHP22830 423 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 GRK2P25098 689 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 ACVR2BQ13705 512 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 LRRC23Q53EV4 343 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-216ENST00000639300 OVOS1Q6IE37 1185 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 FAM183BPQ6ZVS7 135 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 BBS12Q6ZW61 710 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 RUBCNLQ9H714 662 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 WRAP73Q9P2S5 460 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-216ENST00000639300 NFASCO94856 1347 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 hCG_1818297A0A087WSY0 165 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 FBXO21O94952 628 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 MMP8P22894 467 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 AKT1P31749 480 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 QPCTQ16769 361 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 SPDYCQ5MJ68 293 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 TLK2Q86UE8 772 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 ELMOD1Q8N336 334 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 ALLCQ8N6M5 410 aa14.83□□□□□ -0.04
SCARB2-216ENST00000639300 RNF148Q8N7C7 305 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms