RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 OTUD3Q5T2D3 398 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 PTAR1Q7Z6K3 402 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 MYO1HQ8N1T3 1032 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ZFP42Q96MM3 310 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ZNF184Q99676 751 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 CYLDQ9NQC7 956 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ADRA1DP25100 572 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 CENPAP49450 140 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 SPDYCQ5MJ68 293 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 TDRD10Q5VZ19 366 aaKnown RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 GLB1LQ6UWU2 654 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ZSCAN18Q8TBC5 510 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 FIG4Q92562 907 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 SEMA4DQ92854 862 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 PEX1O43933 1283 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 CNOT3O75175 753 aaKnown RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 CLCN3P51790 818 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 MMADHCQ9H3L0 296 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 DNPEPQ9ULA0 475 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 TMCC3Q9ULS5 477 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 MYRFQ9Y2G1 1151 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 AFF2P51816 1311 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 FAM20BO75063 409 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ALADP13716 330 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 TCF3P15923 654 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 EIF2B2P49770 351 aaKnown RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ISLR2Q6UXK2 745 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 SLITRK1Q96PX8 696 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 PTPRMP28827 1452 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 PLA2G6O60733 806 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ZNF177Q13360 481 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ITPK1Q13572 414 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 MYBPC2Q14324 1141 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ANGEL2Q5VTE6 544 aaKnown RBP18.98■□□□□ 0.63
SCARB2-213ENST00000638680 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 ADGRF2Q8IZF7 708 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 SCUBE2Q9NQ36 999 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 BTBD7Q9P203 1132 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 RAD54BQ9Y620 910 aa18.98■□□□□ 0.63
SCARB2-213ENST00000638680 SNTNA6NMZ2 147 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 F9P00740 461 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 SHBGP04278 402 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 RAD23AP54725 363 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 ERMARDQ5T6L9 678 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 TMC5Q6UXY8 1006 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 BHMTQ93088 406 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 FAM120BQ96EK7 910 aaKnown RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 RRN3P2A6NIE6 340 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 ERI2A8K979 691 aaKnown RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 GLP2RO95838 553 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 EPB42P16452 691 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 ITGB3BPQ13352 177 aaPredicted RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 FASTKQ14296 549 aaKnown RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 CYP2R1Q6VVX0 501 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 HDDC2Q7Z4H3 204 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 AGAP11Q8TF27 550 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 SEMA6AQ9H2E6 1030 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 VTI1BQ9UEU0 232 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 CLOCKO15516 846 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 TPH1P17752 444 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 MGAT1P26572 445 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 NFIL3Q16649 462 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 AADACL2Q6P093 401 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 YAF2Q8IY57 180 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 CDRT15Q96T59 188 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 PDE2AO00408 941 aaPredicted RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 TPBGLP0DKB5 382 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 PGAM1P18669 254 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 FAM98BQ52LJ0 330 aaKnown RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 MFSD7Q6UXD7 560 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 PYDC1Q8WXC3 89 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 AGO4Q9HCK5 861 aaKnown RBP18.97■□□□□ 0.63
SCARB2-213ENST00000638680 CHST7Q9NS84 486 aa18.97■□□□□ 0.63
SCARB2-213ENST00000638680 INPP4BO15327 924 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 PPATQ06203 517 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 SNX32Q86XE0 403 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 COPS7BQ9H9Q2 264 aaPredicted RBP18.96■□□□□ 0.63
SCARB2-213ENST00000638680 PTPRHQ9HD43 1115 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 CACNA2D2Q9NY47 1150 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 COPG2Q9UBF2 871 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 PHGDHO43175 533 aaKnown RBP18.96■□□□□ 0.63
SCARB2-213ENST00000638680 UPP2O95045 317 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 ATP4AP20648 1035 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 GP5P40197 560 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 CDH18Q13634 790 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 POU6F1Q14863 301 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 SYTL2Q9HCH5 934 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 STK25O00506 426 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 CYB561D2O14569 222 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 TRIM13O60858 407 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 TNFRSF8P28908 595 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 TMEM119Q4V9L6 283 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 CD302Q8IX05 232 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 RSPH1Q8WYR4 309 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 RIOX1Q9H6W3 641 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 DCXO43602 365 aa18.96■□□□□ 0.63
SCARB2-213ENST00000638680 RSBN1Q5VWQ0 802 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms