RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CCZ1BP86790 482 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 CCZ1P86791 482 aaPredicted RBP20.26■□□□□ 0.83
HLA-A-209ENST00000638375 ZNF77Q15935 545 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 MTSS1LQ765P7 747 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 CELF5Q8N6W0 485 aaKnown RBP20.26■□□□□ 0.83
HLA-A-209ENST00000638375 ACRBPQ8NEB7 543 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 CCDC112Q8NEF3 446 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 RXFP2Q8WXD0 754 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 RSAD2Q8WXG1 361 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 NT5C3BQ969T7 300 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 ELSPBP1Q96BH3 223 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 NPY6RQ99463 290 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 OBP2AQ9NY56 170 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 CALCOCO1Q9P1Z2 691 aa20.26■□□□□ 0.83
HLA-A-209ENST00000638375 REXO2Q9Y3B8 237 aaKnown RBP20.26■□□□□ 0.83
HLA-A-209ENST00000638375 DPYSL4O14531 572 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 ECI2O75521 394 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 ASGR2P07307 311 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 TMEM253P0C7T8 217 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 IRF1P10914 325 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 MAGEA1P43355 309 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 OGDHQ02218 1023 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 EIF4EBP2Q13542 120 aaPredicted RBP20.25■□□□□ 0.83
HLA-A-209ENST00000638375 SPA17Q15506 151 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 C10orf76Q5T2E6 689 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 VITQ6UXI7 678 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 CTNNBL1Q8WYA6 563 aaPredicted RBP20.25■□□□□ 0.83
HLA-A-209ENST00000638375 CFAP57Q96MR6 1250 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 TRIM7Q9C029 511 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 CFAP97Q9P2B7 532 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 STAP1Q9ULZ2 295 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 PCDHA13Q9Y5I0 950 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 SCINQ9Y6U3 715 aa20.25■□□□□ 0.83
HLA-A-209ENST00000638375 HELZP42694 1942 aaKnown RBP20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TMEM191CA6NGB0 347 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 IRAK2O43187 625 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 GREM1O60565 184 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 STC2O76061 302 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 HMBSP08397 361 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 PDGFRAP16234 1089 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 GPD1P21695 349 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 SULT1E1P49888 294 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 CCDC173Q0VFZ6 552 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TRIP4Q15650 581 aaPredicted RBP20.24■□□□□ 0.83
HLA-A-209ENST00000638375 CCDC14Q49A88 953 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TJAP1Q5JTD0 557 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 DCUN1D2Q6PH85 259 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 BNIPLQ7Z465 357 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TTC16Q8NEE8 873 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 E2F7Q96AV8 911 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 SERPINB11Q96P15 392 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 PPP1R9BQ96SB3 815 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TBCBQ99426 244 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 DESI2Q9BSY9 194 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 NUP85Q9BW27 656 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 FAM204AQ9H8W3 233 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 KCNK12Q9HB15 430 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 RRN3Q9NYV6 651 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 INTUQ9ULD6 942 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TFR2Q9UP52 801 aa20.24■□□□□ 0.83
HLA-A-209ENST00000638375 HBS1LQ9Y450 684 aaKnown RBP20.24■□□□□ 0.83
HLA-A-209ENST00000638375 TCF20Q9UGU0 1960 aaKnown RBP20.24■□□□□ 0.83
HLA-A-209ENST00000638375 M0QYT0 321 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 SCAMP3O14828 347 aaKnown RBP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 ARHGAP6O43182 974 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 PTMAP06454 111 aaKnown RBP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 SDC4P31431 198 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 PTPN9P43378 593 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 COG7P83436 770 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 NNTQ13423 1086 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 C15orf59Q2T9L4 293 aaPredicted RBP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 SLC25A52Q3SY17 297 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 DDX42Q86XP3 938 aaKnown RBP eCLIP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 MFSD6LQ8IWD5 586 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 BPIFB1Q8TDL5 484 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 SLC39A13Q96H72 371 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 FCRL2Q96LA5 508 aaPredicted RBP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 NECAB3Q96P71 396 aaPredicted RBP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 MRPL47Q9HD33 250 aaKnown RBP20.23■□□□□ 0.83
HLA-A-209ENST00000638375 DDIT4Q9NX09 232 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 IGSF9Q9P2J2 1179 aa20.23■□□□□ 0.83
HLA-A-209ENST00000638375 UNC80Q8N2C7 3258 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 SYNJ2BP-COX16A0A087WUM0 186 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 RCCD1A6NED2 376 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 IGLV3-27P01718 113 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 ZNF143P52747 638 aaPredicted RBP20.22■□□□□ 0.83
HLA-A-209ENST00000638375 TBX4P57082 545 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 ATP11AP98196 1134 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 ZNF252P-AS1Q0IIN9 211 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 FCHO2Q0JRZ9 810 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 GRM2Q14416 872 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 RAB6CQ53S08 254 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 SH3PXD2AQ5TCZ1 1133 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 NXPE3Q969Y0 559 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 PLD4Q96BZ4 506 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 PGAP3Q96FM1 320 aaPredicted RBP20.22■□□□□ 0.83
HLA-A-209ENST00000638375 RAB6CQ9H0N0 254 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 KCNF1Q9H3M0 494 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 CD320Q9NPF0 282 aa20.22■□□□□ 0.83
HLA-A-209ENST00000638375 COX16Q9P0S2 106 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms