RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TPSB2P20231 275 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 CYP3A5P20815 502 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 ROR2Q01974 943 aaKnown RBP20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 TNFAIP2Q03169 654 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 TPSAB1Q15661 275 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 HSDL1Q3SXM5 330 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 NOL9Q5SY16 702 aaKnown RBP20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 CWF19L1Q69YN2 538 aaKnown RBP20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 TIFABQ6ZNK6 161 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 SIGLEC10Q96LC7 697 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 CCDC106Q9BWC9 280 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 MINDY3Q9H8M7 445 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 PRMT7Q9NVM4 692 aaPredicted RBP20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 GPATCH2LQ9NWQ4 482 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 PIM2Q9P1W9 311 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 SORCS3Q9UPU3 1222 aa20.83■□□□□ 0.92
SYNGAP1-227ENST00000638142 PIK3R2O00459 728 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 MDM4O15151 490 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 GRAP2O75791 330 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 SERPINA6P08185 405 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 MCF2P10911 925 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 CNTFP26441 200 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 NDST1P52848 882 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 INHBEP58166 350 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 EEPD1Q7L9B9 569 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 APOBEC3FQ8IUX4 373 aaKnown RBP20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 TMEM130Q8N3G9 435 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 GALNT15Q8N3T1 639 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 STKLD1Q8NE28 680 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 ZFAND2BQ8WV99 257 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 NFKBIZQ9BYH8 718 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 PDGFDQ9GZP0 370 aaPredicted RBP20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 C1orf21Q9H246 121 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 NGRNQ9NPE2 291 aaKnown RBP20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 THAP1Q9NVV9 213 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 MAD1L1Q9Y6D9 718 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 HMX2A2RU54 273 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 MAP3K13O43283 966 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 DESP17661 470 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 STX3Q13277 289 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 STILQ15468 1287 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 ZNF534Q76KX8 674 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 FAM172AQ8WUF8 416 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 SNRNP25Q9BV90 132 aaKnown RBP20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 XAB2Q9HCS7 855 aaKnown RBP20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 KRT82Q9NSB4 513 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 DNAJB4Q9UDY4 337 aa20.82■□□□□ 0.92
SYNGAP1-227ENST00000638142 GCATO75600 419 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 TOMM70O94826 608 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 ARIH2O95376 493 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 SDC4P31431 198 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 KDSRQ06136 332 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 FAM182AQ5T1J6 154 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 STXBP5Q5T5C0 1151 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 MROH9Q5TGP6 573 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 TRMT10BQ6PF06 316 aaKnown RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 KYAT3Q6YP21 454 aaKnown RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 ULK2Q8IYT8 1036 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 FBXO27Q8NI29 283 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 TRAPPC12Q8WVT3 735 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 ZNF395Q9H8N7 513 aaPredicted RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 BTBD7Q9P203 1132 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 MARCOQ9UEW3 520 aaPredicted RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 PCDHA11Q9Y5I1 949 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 WASF2Q9Y6W5 498 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 PFKMP08237 780 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 KITP10721 976 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 SLC26A2P50443 739 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 ACTR3P61158 418 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 GSTA3Q16772 222 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 CELF3Q5SZQ8 465 aaKnown RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 EFCAB12Q6NXP0 572 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 OLFML1Q6UWY5 402 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 CYS1Q717R9 158 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 TRAPPC9Q96Q05 1148 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 LBHD1Q9BQE6 289 aaPredicted RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 NT5C1AQ9BXI3 368 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 GCOM2Q9BZD3 368 aaPredicted RBP20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 C2CD2Q9Y426 696 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 A0A0G2JMZ2 1700 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 LRRC37A2A6NM11 1700 aa20.81■□□□□ 0.92
SYNGAP1-227ENST00000638142 SRCAPQ6ZRS2 3230 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 ANKRD33BA6NCL7 494 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 IQCF3P0C7M6 154 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 CLCN3P51790 818 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 FAM187BQ17R55 369 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 NBPF20Q3BBV1 942 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 RIPOR1Q6ZS17 1223 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 MYLK4Q86YV6 388 aaPredicted RBP20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 DEPDC1BQ8WUY9 529 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 AFG1LQ8WV93 481 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 RILPQ96NA2 401 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 C20orf27Q9GZN8 174 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 NRDE2Q9H7Z3 1164 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 KAT6AQ92794 2004 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 MAGEA13PA6NCF6 341 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 PEX10O60683 326 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 MAP3K6O95382 1288 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 METTL18O95568 372 aa20.8■□□□□ 0.92
SYNGAP1-227ENST00000638142 STAU1O95793 577 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms