RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TMEM102Q8N9M5 508 aaPredicted RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 USP33Q8TEY7 942 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 NKD2Q969F2 451 aaPredicted RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 ANKRD60Q9BZ19 345 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 CDH19Q9H159 772 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 MOV10Q9HCE1 1003 aaKnown RBP12.4□□□□□ -0.43
CAPN3-221ENST00000638141 DNAJC28Q9NX36 388 aa12.4□□□□□ -0.43
CAPN3-221ENST00000638141 CDK5RAP2Q96SN8 1893 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 ARHGEF37A1IGU5 675 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 H3BMQ9 156 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 GCATO75600 419 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 ATE1O95260 518 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 ITGAVP06756 1048 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 LDHCP07864 332 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 GYS1P13807 737 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 LLGL1Q15334 1064 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 CHI3L2Q15782 390 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 TRIM71Q2Q1W2 868 aaKnown RBP12.39□□□□□ -0.43
CAPN3-221ENST00000638141 KRT39Q6A163 491 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 SCARA3Q6AZY7 606 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 RINT1Q6NUQ1 792 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 CAPN12Q6ZSI9 719 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 DENND5BQ6ZUT9 1274 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF720Q7Z2F6 126 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 BPHLQ86WA6 291 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-221ENST00000638141 TTC30AQ86WT1 665 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF677Q86XU0 584 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 LILRA2Q8N149 483 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 FIBCD1Q8N539 461 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 HIPK4Q8NE63 616 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 CCDC127Q96BQ5 260 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 ZNF512Q96ME7 567 aaPredicted RBP12.39□□□□□ -0.43
CAPN3-221ENST00000638141 COG8Q96MW5 612 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 EBF4Q9BQW3 602 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 TANC1Q9C0D5 1861 aa12.39□□□□□ -0.43
CAPN3-221ENST00000638141 TTC34A8MYJ7 566 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 XPO1O14980 1071 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 CYP11B1P15538 503 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 NMT1P30419 496 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 HIBADHP31937 336 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 PSMC6P62333 389 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TRPC3Q13507 836 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 CES4AQ5XG92 561 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 ANKRD26P1Q6NSI1 321 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 ISLR2Q6UXK2 745 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 PPIL6Q8IXY8 311 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 COLGALT2Q8IYK4 626 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 RCOR2Q8IZ40 523 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 GALNT4Q8N4A0 578 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 GLIS1Q8NBF1 620 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 OR7G1Q8NGA0 311 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 LILRB4Q8NHJ6 448 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 GSDMBQ8TAX9 411 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 PIWIL2Q8TC59 973 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TFB1MQ8WVM0 346 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 C1orf50Q9BV19 199 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TUFT1Q9NNX1 390 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 PNPLA8Q9NP80 782 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TPPPO94811 219 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 SLITRK3O94933 977 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 SERPINB2P05120 415 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 BPGMP07738 259 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 INHBAP08476 426 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 P4HA1P13674 534 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 PRDX5P30044 214 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 CYP2J2P51589 502 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 VAMP7P51809 220 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 KCNA1Q09470 495 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 MTMR2Q13614 643 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 ANGEL2Q5VTE6 544 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TTC39BQ5VTQ0 682 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 ANKMY2Q8IV38 441 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 NUDCD3Q8IVD9 361 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 MYCT1Q8N699 235 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 DCUN1D5Q9BTE7 237 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 STRA6Q9BX79 667 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 HEMGNQ9BXL5 484 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 JMJD4Q9H9V9 463 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 XAB2Q9HCS7 855 aaKnown RBP12.38□□□□□ -0.43
CAPN3-221ENST00000638141 ANKMY1Q9P2S6 941 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 CPQQ9Y646 472 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 IKBKGQ9Y6K9 419 aa12.38□□□□□ -0.43
CAPN3-221ENST00000638141 APOEP02649 317 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 MAPTP10636 758 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
CAPN3-221ENST00000638141 STAT3P40763 770 aa12.37□□□□□ -0.43
CAPN3-221ENST00000638141 PDE1CQ14123 709 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms