RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SPATA21Q7Z572 469 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 MFHAS1Q9Y4C4 1052 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 USP3Q9Y6I4 520 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 SYNJ2BP-COX16A0A087WUM0 186 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 CAPN15O75808 1086 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 SLC1A5Q15758 541 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 RSPH3Q86UC2 560 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 MZB1Q8WU39 189 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 KCTD13Q8WZ19 329 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 FRMD8Q9BZ67 464 aaPredicted RBP22.3■■□□□ 1.16
CLN6-224ENST00000638076 DTLQ9NZJ0 730 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 COX16Q9P0S2 106 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 GRID1Q9ULK0 1009 aa22.3■■□□□ 1.16
CLN6-224ENST00000638076 CHRNA1P02708 482 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 THP07101 528 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 FAM163BP0C2L3 166 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 ARL4AP40617 200 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 MAGEA6P43360 314 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 CLCNKBP51801 687 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 MAP3K7CLP57077 242 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 KBTBD12Q3ZCT8 623 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 OTUD1Q5VV17 481 aaPredicted RBP22.29■■□□□ 1.16
CLN6-224ENST00000638076 CGB2Q6NT52 195 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 CAND1Q86VP6 1230 aaKnown RBP22.29■■□□□ 1.16
CLN6-224ENST00000638076 SIX6OS1Q8N1H7 587 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 PITPNM3Q9BZ71 974 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 CRTAC1Q9NQ79 661 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 KRT82Q9NSB4 513 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 ABCF3Q9NUQ8 709 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 MIOSQ9NXC5 875 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 GCATO75600 419 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 METTL18O95568 372 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 CYBAP13498 195 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 GBP2P32456 591 aaPredicted RBP22.29■■□□□ 1.16
CLN6-224ENST00000638076 MTFR1Q15390 333 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 HACE1Q8IYU2 909 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 CFAP36Q96G28 342 aa22.29■■□□□ 1.16
CLN6-224ENST00000638076 QKIQ96PU8 341 aaKnown RBP eCLIP22.29■■□□□ 1.16
CLN6-224ENST00000638076 SENP6Q9GZR1 1112 aaPredicted RBP22.29■■□□□ 1.16
CLN6-224ENST00000638076 SSU72Q9NP77 194 aaKnown RBP22.29■■□□□ 1.16
CLN6-224ENST00000638076 TIMM13Q9Y5L4 95 aaPredicted RBP22.29■■□□□ 1.16
CLN6-224ENST00000638076 SPAG6O75602 509 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 FAM200BP0CF97 657 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 NOS2P35228 1153 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 TKTL1P51854 596 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 INHBEP58166 350 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 CBLBQ13191 982 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 C4orf22Q6V702 233 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 FAM47EQ6ZV65 393 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 CNPY4Q8N129 248 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 VPS52Q8N1B4 723 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 TMPRSS4Q9NRS4 437 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 TOMM70O94826 608 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 SLC10A3P09131 477 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 RABGGTBP53611 331 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 DNAJC3Q13217 504 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 SYPL2Q5VXT5 272 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 HEATR6Q6AI08 1181 aaKnown RBP22.28■■□□□ 1.16
CLN6-224ENST00000638076 NT5C3BQ969T7 300 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 NPY6RQ99463 290 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 GGT7Q9UJ14 662 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 STAP1Q9ULZ2 295 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 IKBKGQ9Y6K9 419 aa22.28■■□□□ 1.16
CLN6-224ENST00000638076 ARL5CA6NH57 179 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 M0QYT0 321 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 HFE2Q6ZVN8 426 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 C3orf58Q8NDZ4 430 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 SPOCK2Q92563 424 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 SYT15Q9BQS2 421 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 CHST12Q9NRB3 414 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 ARL2BPQ9Y2Y0 163 aa22.27■■□□□ 1.16
CLN6-224ENST00000638076 TRPM7Q96QT4 1865 aa22.27■■□□□ 1.15
CLN6-224ENST00000638076 GOLGA8RI6L899 631 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 ZWINTO95229 277 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 LHX1P48742 406 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 SCNN1GP51170 649 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 PTK7Q13308 1070 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 PDK4Q16654 411 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 HHATQ5VTY9 493 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 LVRNQ6Q4G3 990 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 DSTYKQ6XUX3 929 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 BNIPLQ7Z465 357 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 PRPF39Q86UA1 669 aaKnown RBP22.26■■□□□ 1.15
CLN6-224ENST00000638076 SLC44A1Q8WWI5 657 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 TRIB2Q92519 343 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 KLF6Q99612 283 aaPredicted RBP22.26■■□□□ 1.15
CLN6-224ENST00000638076 POPDC2Q9HBU9 364 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 ARHGEF4Q9NR80 690 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 RCOR3Q9P2K3 495 aaPredicted RBP22.26■■□□□ 1.15
CLN6-224ENST00000638076 PRKAG3Q9UGI9 489 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 ZC3H7BQ9UGR2 993 aaKnown RBP22.26■■□□□ 1.15
CLN6-224ENST00000638076 NR2E3Q9Y5X4 410 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 INHBAP08476 426 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 NME3Q13232 169 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 AGMOQ6ZNB7 445 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 SERINC5Q86VE9 423 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 PSTKQ8IV42 348 aaKnown RBP22.26■■□□□ 1.15
CLN6-224ENST00000638076 TMEM86AQ8N2M4 240 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 MCUQ8NE86 351 aa22.26■■□□□ 1.15
CLN6-224ENST00000638076 TFB1MQ8WVM0 346 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms