RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KHDRBS3O75525 346 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 DBIP07108 87 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 EIF4BP23588 611 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 CSHL1Q14406 222 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 TTC23Q5W5X9 447 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 CES3Q6UWW8 571 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 CATSPER2Q96P56 530 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 ABCG4Q9H172 646 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 GPN3Q9UHW5 284 aaPredicted RBP17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 RGL2O15211 777 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 FAM86B2P0C5J1 330 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 PDZK1Q5T2W1 519 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 ERP27Q96DN0 273 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 TRIM9Q9C026 710 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 WWP1Q9H0M0 922 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 JMJD4Q9H9V9 463 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 DUSP12Q9UNI6 340 aa17.45■□□□□ 0.38
CACNA1A-253ENST00000637927 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 RAD51CO43502 376 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 TIMM44O43615 452 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 OR7A10O76100 309 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PTGER2P43116 358 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PTSQ03393 145 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 STK4Q13043 487 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 NAXEQ8NCW5 288 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 TRNT1Q96Q11 434 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 GRIP2Q9C0E4 1043 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 CYB561D2O14569 222 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PSMD3O43242 534 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 CDC40O60508 579 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 IL2P60568 153 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF671Q8TAW3 534 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 TRIM63Q969Q1 353 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF354BQ96LW1 612 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 RUSC1Q9BVN2 902 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PAIP1Q9H074 479 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 VPS45Q9NRW7 570 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 TBC1D23Q9NUY8 699 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 CRB1P82279 1406 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 IL18RAPO95256 599 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 XRCC4Q13426 336 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 SUZ12Q15022 739 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ESRP1Q6NXG1 681 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 CYP4Z1Q86W10 505 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ATP6V0D2Q8N8Y2 350 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 TRIT1Q9H3H1 467 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 TNS3Q68CZ2 1445 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 C19orf81C9J6K1 198 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 SMAPO00193 183 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 SLC37A4O43826 429 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF24P17028 368 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 NRSN1Q8IZ57 195 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 UCMAQ8WVF2 138 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF333Q96JL9 665 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 MARK4Q96L34 752 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 LOC102724159A0A0B4J2E5 919 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PWP2Q15269 919 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 DCDC2CA8MYV0 355 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 LY6KQ17RY6 165 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PLEKHA7Q6IQ23 1121 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 ATG4AQ8WYN0 398 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 BPIFA3Q9BQP9 254 aa17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PSMC3IPQ9P2W1 217 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-253ENST00000637927 PFASO15067 1338 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 INMTO95050 263 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 RHOCP08134 193 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 MC1RQ01726 317 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 COL9A2Q14055 689 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 MYO1HQ8N1T3 1032 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 TOP1MTQ969P6 601 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 EPHB3P54753 998 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 TRIM16LQ309B1 348 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 USP49Q70CQ1 688 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 CAMKK2Q96RR4 588 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 MPP6Q9NZW5 540 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 ZBTB22O15209 634 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 SEPT4O43236 478 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 KLHL41O60662 606 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 ALOX12P18054 663 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 CCT8P50990 548 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 SRLQ86TD4 932 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 CDK20Q8IZL9 346 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 GLT1D1Q96MS3 346 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 PNMA8CA0A1B0GUJ8 204 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 KPNA3O00505 521 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 SLC16A3O15427 465 aaKnown RBP17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 STAT4Q14765 748 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 AKAP7Q9P0M2 348 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 PLEKP08567 350 aaPredicted RBP17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 C9orf131Q5VYM1 1079 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 TTC39CQ8N584 583 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 CIDEBQ9UHD4 219 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 USP20Q9Y2K6 914 aa17.43■□□□□ 0.38
CACNA1A-253ENST00000637927 PLEKHG2Q9H7P9 1386 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms