RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 MSI1O43347 362 aaKnown RBP17.96■□□□□ 0.47
CLN6-218ENST00000637223 DAB1O75553 588 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 GJB6O95452 261 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 CALB1P05937 261 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 SRFP11831 508 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 TCF3P15923 654 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
CLN6-218ENST00000637223 DCAF6Q58WW2 860 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 CC2D1AQ6P1N0 951 aaPredicted RBP17.96■□□□□ 0.47
CLN6-218ENST00000637223 MSANTD2Q6P1R3 559 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 MCOLN2Q8IZK6 566 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 ADAM32Q8TC27 787 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 ASIC4Q96FT7 647 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 SLC2A13Q96QE2 648 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 CHP1Q99653 195 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 IRF2BPLQ9H1B7 796 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 METTL5Q9NRN9 209 aaKnown RBP17.96■□□□□ 0.47
CLN6-218ENST00000637223 WNT6Q9Y6F9 365 aa17.96■□□□□ 0.47
CLN6-218ENST00000637223 A0A087X0T9 212 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 H0Y858 1186 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 CHADO15335 359 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 FTLP02792 175 aaPredicted RBP17.95■□□□□ 0.46
CLN6-218ENST00000637223 FAM228BP0C875 321 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 AVPR2P30518 371 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 SCNN1AP37088 669 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 PITX1P78337 314 aaPredicted RBP17.95■□□□□ 0.46
CLN6-218ENST00000637223 SIGLEC14Q08ET2 396 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 ARHGAP29Q52LW3 1261 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 TRIM68Q6AZZ1 485 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 BEND5Q7L4P6 421 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 TAC4Q86UU9 113 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 DEF6Q9H4E7 631 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 DUS2Q9NX74 493 aaKnown RBP17.95■□□□□ 0.46
CLN6-218ENST00000637223 KMT2EQ8IZD2 1858 aa17.95■□□□□ 0.46
CLN6-218ENST00000637223 ANAPC1Q9H1A4 1944 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 RTN2O75298 545 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 STC2O76061 302 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 GZMAP12544 262 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 IFNAR2P48551 515 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 COG7P83436 770 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 TNK2Q07912 1038 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 PPP1R2P3Q6NXS1 205 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 UBALD2Q8IYN6 164 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 EMC1Q8N766 993 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 TTC8Q8TAM2 541 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 OSCP1Q8WVF1 389 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 ANP32BQ92688 251 aaKnown RBP17.94■□□□□ 0.46
CLN6-218ENST00000637223 IRF7Q92985 503 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 LINC00597Q9H2U6 94 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 FAM204AQ9H8W3 233 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 SLC2A4RGQ9NR83 387 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.94■□□□□ 0.46
CLN6-218ENST00000637223 WDR35Q9P2L0 1181 aa17.94■□□□□ 0.46
CLN6-218ENST00000637223 LSM7Q9UK45 103 aaKnown RBP17.94■□□□□ 0.46
CLN6-218ENST00000637223 NUP210Q8TEM1 1887 aaPredicted RBP17.94■□□□□ 0.46
CLN6-218ENST00000637223 CACNA1HO95180 2353 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 SYNJ2BP-COX16A0A087WUM0 186 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 SSU72P8A0A1W2PR75 194 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 E2F8A0AVK6 867 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 ATMINO43313 823 aaPredicted RBP17.93■□□□□ 0.46
CLN6-218ENST00000637223 GREM1O60565 184 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 ARSAP15289 507 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 RRM1P23921 792 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 FLT3P36888 993 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 CDK17Q00537 523 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 GFPT1Q06210 699 aaPredicted RBP17.93■□□□□ 0.46
CLN6-218ENST00000637223 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
CLN6-218ENST00000637223 CCDC122Q5T0U0 273 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 DNAJC24Q6P3W2 148 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.93■□□□□ 0.46
CLN6-218ENST00000637223 BBS7Q8IWZ6 715 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 JOSD2Q8TAC2 188 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 FAM83CQ9BQN1 747 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 SELENOOQ9BVL4 669 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 ISCUQ9H1K1 167 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 EBF3Q9H4W6 596 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 NHEJ1Q9H9Q4 299 aaPredicted RBP17.93■□□□□ 0.46
CLN6-218ENST00000637223 COX16Q9P0S2 106 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 TMEM59LQ9UK28 342 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 HBS1LQ9Y450 684 aaKnown RBP17.93■□□□□ 0.46
CLN6-218ENST00000637223 DENND4CQ5VZ89 1909 aa17.93■□□□□ 0.46
CLN6-218ENST00000637223 SPTBN4Q9H254 2564 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 ARNTLO00327 626 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 AKR1B10O60218 316 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 TRUB2O95900 331 aaKnown RBP17.92■□□□□ 0.46
CLN6-218ENST00000637223 KLKB1P03952 638 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 KRT3P12035 628 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 ABCB4P21439 1286 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 CORO1AP31146 461 aaKnown RBP17.92■□□□□ 0.46
CLN6-218ENST00000637223 NOS2P35228 1153 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 MATKP42679 507 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 GSCP56915 257 aaPredicted RBP17.92■□□□□ 0.46
CLN6-218ENST00000637223 TBX4P57082 545 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 PFKPQ01813 784 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 PDGFRLQ15198 375 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 TRIP4Q15650 581 aaPredicted RBP17.92■□□□□ 0.46
CLN6-218ENST00000637223 ASTE1Q2TB18 679 aaPredicted RBP17.92■□□□□ 0.46
CLN6-218ENST00000637223 TRNP1Q6NT89 227 aa17.92■□□□□ 0.46
CLN6-218ENST00000637223 ALKBH5Q6P6C2 394 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms