RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 TCRBV21S2A2A0A5A6 115 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 M0QYV0 167 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 TULP2O00295 520 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 DCLK1O15075 740 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 MAP3K13O43283 966 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 LCP1P13796 627 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 NTSR1P30989 418 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 MPLP40238 635 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 HARS2P49590 506 aaKnown RBP19.85■□□□□ 0.77
CLN6-213ENST00000636212 E2F5Q15329 346 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 RRAGAQ7L523 313 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 HMGB4Q8WW32 186 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 BHMTQ93088 406 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 FAM81BQ96LP2 452 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 VPS45Q9NRW7 570 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 INVSQ9Y283 1065 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 STARD13Q9Y3M8 1113 aa19.85■□□□□ 0.77
CLN6-213ENST00000636212 MYOFQ9NZM1 2061 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 HOXB2P14652 356 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 ATXN1P54253 815 aaKnown RBP19.84■□□□□ 0.77
CLN6-213ENST00000636212 CREB5Q02930 508 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 TPD52L1Q16890 204 aaPredicted RBP19.84■□□□□ 0.77
CLN6-213ENST00000636212 DENND1CQ8IV53 801 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 CHPFQ8IZ52 775 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 SCML4Q8N228 414 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 LMO3Q8TAP4 145 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 INTS2Q9H0H0 1204 aaKnown RBP19.84■□□□□ 0.77
CLN6-213ENST00000636212 PLK2Q9NYY3 685 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLN6-213ENST00000636212 HBS1LQ9Y450 684 aaKnown RBP19.84■□□□□ 0.77
CLN6-213ENST00000636212 GPR179Q6PRD1 2367 aa19.84■□□□□ 0.77
CLN6-213ENST00000636212 ANTXRLA6NF34 631 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 KLKB1P03952 638 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 KRT5P13647 590 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 ANP32AP39687 249 aaKnown RBP19.83■□□□□ 0.77
CLN6-213ENST00000636212 BSPRYQ5W0U4 402 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 PMS2CLQ68D20 193 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 ENOSF1Q7L5Y1 443 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 FMNL3Q8IVF7 1028 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 ARHGEF19Q8IW93 802 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 UCMAQ8WVF2 138 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 IRGQQ8WZA9 623 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 TFAP2BQ92481 460 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 ZDHHC4Q9NPG8 344 aa19.83■□□□□ 0.77
CLN6-213ENST00000636212 AGO1Q9UL18 857 aaKnown RBP19.83■□□□□ 0.77
CLN6-213ENST00000636212 RALGAPA1Q6GYQ0 2036 aa19.83■□□□□ 0.76
CLN6-213ENST00000636212 SLC30A4O14863 429 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 TRIM24O15164 1050 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 MED7O43513 233 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 ADAM23O75077 832 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 FBXO21O94952 628 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 BRD2P25440 801 aaKnown RBP19.82■□□□□ 0.76
CLN6-213ENST00000636212 RGS7P49802 495 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 MFAP3P55082 362 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 DAOAP59103 153 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 ZNF445P59923 1031 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 SF3A2Q15428 464 aaKnown RBP19.82■□□□□ 0.76
CLN6-213ENST00000636212 CCDC6Q16204 474 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 PKDCCQ504Y2 493 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 IL31Q6EBC2 164 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 LPCAT2Q7L5N7 544 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 CPXM2Q8N436 756 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 MLKLQ8NB16 471 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 DDI1Q8WTU0 396 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 SLC35F5Q8WV83 523 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 DDX1Q92499 740 aaKnown RBP19.82■□□□□ 0.76
CLN6-213ENST00000636212 NDRG1Q92597 394 aaKnown RBP19.82■□□□□ 0.76
CLN6-213ENST00000636212 EDEM1Q92611 657 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 KAT5Q92993 513 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 HSFY1Q96LI6 401 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 UBE2TQ9NPD8 197 aaPredicted RBP19.82■□□□□ 0.76
CLN6-213ENST00000636212 EML5Q05BV3 1969 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 FRYLO94915 3013 aa19.82■□□□□ 0.76
CLN6-213ENST00000636212 SPTBN4Q9H254 2564 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 YJEFN3A6XGL0 299 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 E7ENQ6 273 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 RNF225M0QZC1 329 aaPredicted RBP19.81■□□□□ 0.76
CLN6-213ENST00000636212 CAVIN2O95810 425 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 PENKP01210 267 aaPredicted RBP19.81■□□□□ 0.76
CLN6-213ENST00000636212 HNRNPLP14866 589 aaKnown RBP eCLIP19.81■□□□□ 0.76
CLN6-213ENST00000636212 WASP42768 502 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 DHPSP49366 369 aaPredicted RBP19.81■□□□□ 0.76
CLN6-213ENST00000636212 TRIP4Q15650 581 aaPredicted RBP19.81■□□□□ 0.76
CLN6-213ENST00000636212 PLA2G2CQ5R387 149 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 EGFLAMQ63HQ2 1017 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 TOGARAM2Q6ZUX3 1019 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 CYP2U1Q7Z449 544 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 OLIG1Q8TAK6 271 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 SLC27A6Q9Y2P4 619 aa19.81■□□□□ 0.76
CLN6-213ENST00000636212 BCLAF3A2AJT9 711 aaKnown RBP19.8■□□□□ 0.76
CLN6-213ENST00000636212 PRRT4C9JH25 899 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 GFRA2O00451 464 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 NPC1O15118 1278 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 SART1O43290 800 aaKnown RBP19.8■□□□□ 0.76
CLN6-213ENST00000636212 LATS1O95835 1130 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 CISD3P0C7P0 127 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 CHRM1P11229 460 aaPredicted RBP19.8■□□□□ 0.76
CLN6-213ENST00000636212 P2RY2P41231 377 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 ACADSBP45954 432 aa19.8■□□□□ 0.76
CLN6-213ENST00000636212 MTIF2P46199 727 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms