RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CDC25CP30307 473 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 TSR1Q2NL82 804 aaKnown RBP8.9□□□□□ -0.99
CDKL5-209ENST00000635828 ATP13A4Q4VNC1 1196 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 SNX30Q5VWJ9 437 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 RFWD3Q6PCD5 774 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 SLC26A9Q7LBE3 791 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 NUP85Q9BW27 656 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 EBF3Q9H4W6 596 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 TASP1Q9H6P5 420 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 MARCH2Q9P0N8 246 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 CFAP97Q9P2B7 532 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 CLEC4EQ9ULY5 219 aa8.9□□□□□ -0.99
CDKL5-209ENST00000635828 TMEM110-MUSTN1A8MSY1 372 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 CCP110O43303 1012 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 STC2O76061 302 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 C1RP00736 705 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ARSAP15289 507 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 HOXC13P31276 330 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 GPC5P78333 572 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 KCNT1Q5JUK3 1230 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 DENND1CQ8IV53 801 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 CCDC185Q8N715 623 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 SLC35G2Q8TBE7 412 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 IPO4Q8TEX9 1081 aaKnown RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 SLC2A13Q96QE2 648 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 PEBP4Q96S96 227 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 KLHL11Q9NVR0 708 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 MUTYHQ9UIF7 546 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 DAAM1Q9Y4D1 1078 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 BZW2Q9Y6E2 419 aaKnown RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 TRUB2O95900 331 aaKnown RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 GZMAP12544 262 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 PDGFRAP16234 1089 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ATP5C1P36542 298 aaKnown RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 MTHFRP42898 656 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 HDAC4P56524 1084 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 EIF4EBP2Q13542 120 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 SMTNL2Q2TAL5 461 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 PLEKHA7Q6IQ23 1121 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 DNAJC24Q6P3W2 148 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 CIR1Q86X95 450 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 C3orf20Q8ND61 904 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 SELENOOQ9BVL4 669 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 KLF16Q9BXK1 252 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ZDHHC4Q9NPG8 344 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 GPATCH2LQ9NWQ4 482 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 DDIT4Q9NX09 232 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 FAM72CH0Y354 149 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 IL1R2P27930 398 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ACADSBP45954 432 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 SULT1E1P49888 294 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 CDK17Q00537 523 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 C1QBPQ07021 282 aaKnown RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ARTNQ5T4W7 220 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 FAM72AQ5TYM5 149 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 NADSYN1Q6IA69 706 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 FAM72DQ6L9T8 149 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 TPGS1Q6ZTW0 290 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 FAM72BQ86X60 149 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 SMARCD2Q92925 531 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ERLEC1Q96DZ1 483 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 ABCC13Q9NSE7 274 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 UXTQ9UBK9 157 aaPredicted RBP8.89□□□□□ -0.99
CDKL5-209ENST00000635828 PCSK1NQ9UHG2 260 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 USTQ9Y2C2 406 aa8.89□□□□□ -0.99
CDKL5-209ENST00000635828 TSPAN3O60637 253 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 SLC6A4P31645 630 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 MATKP42679 507 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 HTR4Q13639 388 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 ZNF268Q14587 947 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 TRIM72Q6ZMU5 477 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 CYP4V2Q6ZWL3 525 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 CFAP52Q8N1V2 620 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 SLC44A3Q8N4M1 653 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 NOX5Q96PH1 765 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 NPY6RQ99463 290 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 TRMT1Q9NXH9 659 aaKnown RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 ANAPC7Q9UJX3 599 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 PACSIN2Q9UNF0 486 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 TRAV19A0A0A6YYK7 116 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 MACROD2A1Z1Q3 448 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 TMEM191CA6NGB0 347 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 SIGLEC16A6NMB1 481 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 LOC730098B7Z3J9 87 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 ZNF197O14709 1029 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 LCA5LO95447 670 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 IGLV3-25P01717 112 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 PTMAP06454 111 aaKnown RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 TNNT1P13805 278 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 MAGEA1P43355 309 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 ZNF77Q15935 545 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 CA9Q16790 459 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 TDRD5Q8NAT2 981 aaKnown RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 FAM172AQ8WUF8 416 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 IQCDQ96DY2 449 aa8.88□□□□□ -0.99
CDKL5-209ENST00000635828 FCRL2Q96LA5 508 aaPredicted RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 FBRSL1Q9HCM7 1045 aaKnown RBP8.88□□□□□ -0.99
CDKL5-209ENST00000635828 LZTFL1Q9NQ48 299 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms