RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 RGMBQ6NW40 437 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TAPT1Q6NXT6 567 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 FAM183BPQ6ZVS7 135 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PIGWQ7Z7B1 504 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CHSY1Q86X52 802 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TFAP2BQ92481 460 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 E2F7Q96AV8 911 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TTC1Q99614 292 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 FTHL17Q9BXU8 183 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SDCBP2Q9H190 292 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PCDH18Q9HCL0 1135 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CHMP2BQ9UQN3 213 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SSX2IPQ9Y2D8 614 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CDY2AQ9Y6F7 541 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CDY1Q9Y6F8 540 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TAF1P21675 1872 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TYW5A2RUC4 315 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 H7C4K7 107 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 LCP1P13796 627 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 GRTP1Q5TC63 336 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 C1orf228Q6PIY5 440 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 RTP4Q96DX8 246 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CPB2Q96IY4 423 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SERPINI1Q99574 410 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 RABEP2Q9H5N1 569 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 LRFN2Q9ULH4 789 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 VPS9D1Q9Y2B5 631 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PTPRJQ12913 1337 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 MBLAC1A4D2B0 266 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 M0QYT0 321 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ARIH2O95376 493 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PARNO95453 639 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 KRT4P19013 534 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TYK2P29597 1187 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SCTRP47872 440 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CDH17Q12864 832 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CCDC153Q494R4 210 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 DCAF6Q58WW2 860 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CAPN12Q6ZSI9 719 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 NLGN2Q8NFZ4 835 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SNRNP25Q9BV90 132 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 NR2E1Q9Y466 385 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SPECC1L-ADORA2AF8WAN1 911 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 AP1G2O75843 785 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 MPOP05164 745 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF286BP0CG31 522 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CYP2B6P20813 491 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 NFKBIAP25963 317 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ETFBP38117 255 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 MAPRE2Q15555 327 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 KCNT1Q5JUK3 1230 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SLC9A4Q6AI14 798 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 LVRNQ6Q4G3 990 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SCML4Q8N228 414 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 LINC01465Q8N7H1 131 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ATP6V0D2Q8N8Y2 350 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 GDAP1Q8TB36 358 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PTCD2Q8WV60 388 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 MRRFQ96E11 262 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 CFAP36Q96G28 342 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 FAR2Q96K12 515 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 NUDCD1Q96RS6 583 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 C16orf70Q9BSU1 422 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 MRPL9Q9BYD2 267 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PDGFDQ9GZP0 370 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 DNAJC17Q9NVM6 304 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 KLHL11Q9NVR0 708 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 MKS1Q9NXB0 559 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ANGPTL2Q9UKU9 493 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 KLF11O14901 512 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SMPD1P17405 629 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TKTL1P51854 596 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 IFI35P80217 286 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TAZQ16635 292 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ZBTB41Q5SVQ8 909 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PPHLN1Q8NEY8 458 aaKnown RBP4.71□□□□□ -1.66
SCN1A-210ENST00000635776 RDH11Q8TC12 318 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 SLC35F5Q8WV83 523 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 FAM167BQ9BTA0 163 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 COLEC11Q9BWP8 271 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 WDCPQ9H6R7 721 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ETNK1Q9HBU6 452 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 TXNRD2Q9NNW7 524 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 PDGFCQ9NRA1 345 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ABCC13Q9NSE7 274 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 ANKRD6Q9Y2G4 727 aa4.71□□□□□ -1.66
SCN1A-210ENST00000635776 IL1BP01584 269 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 HSPA8P11142 646 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 ELK3P41970 407 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 RAP1GAPP47736 663 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 CDH8P55286 799 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 RPL10AP62906 217 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SMTNL2Q2TAL5 461 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 SWT1Q5T5J6 900 aaKnown RBP4.7□□□□□ -1.66
SCN1A-210ENST00000635776 DEFB106AQ8N104 65 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 B3GALNT2Q8NCR0 500 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 JOSD2Q8TAC2 188 aa4.7□□□□□ -1.66
SCN1A-210ENST00000635776 QKIQ96PU8 341 aaKnown RBP eCLIP4.7□□□□□ -1.661e-6■■■■□ 23.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms