RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 OR6B2Q6IFH4 312 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 C1orf228Q6PIY5 440 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 RHBDF2Q6PJF5 856 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 TXNDC11Q6PKC3 985 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SLC26A9Q7LBE3 791 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 ZNF397Q8NF99 534 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SLC30A5Q8TAD4 765 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 DQX1Q8TE96 717 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 FAM3CQ92520 227 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SYN2Q92777 582 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 FAM149B1Q96BN6 582 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 PLD4Q96BZ4 506 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SLC2A13Q96QE2 648 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 OSBPL6Q9BZF3 934 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 FOXQ1Q9C009 403 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SYNCQ9H7C4 482 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 POPDC2Q9HBU9 364 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 LTB4R2Q9NPC1 389 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 LSM7Q9UK45 103 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SIT1Q9Y3P8 196 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MYOFQ9NZM1 2061 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 FAM170BA6NMN3 283 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MSI1O43347 362 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 HSF2BPO75031 334 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 IGLV3-25P01717 112 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 IGLV3-27P01718 113 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 GYPCP04921 128 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 HMBSP08397 361 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 TARSP26639 723 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CORO1AP31146 461 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SCNN1AP37088 669 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MRE11P49959 708 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 VCPP55072 806 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 ZBED6P86452 979 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 AMPD2Q01433 879 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CENPCQ03188 943 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 RING1Q06587 406 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 PTP4A2Q12974 167 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 EIF4EBP2Q13542 120 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 ASIC2Q16515 512 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CLEC16AQ2KHT3 1053 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 GAB4Q2WGN9 574 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 C2CD6Q53TS8 623 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 LY6G5CQ5SRR4 150 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 HGSNATQ68CP4 663 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SPECC1LQ69YQ0 1117 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MMS22LQ6ZRQ5 1243 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 TOGARAM2Q6ZUX3 1019 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 XYLT1Q86Y38 959 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 PHF13Q86YI8 300 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 SUGP1Q8IWZ8 645 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CCDC105Q8IYK2 499 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 DEFB106AQ8N104 65 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 TMEM105Q8N8V8 129 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MSANTD4Q8NCY6 345 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 PJA1Q8NG27 643 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CPLX3Q8WVH0 158 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 CLDN23Q96B33 292 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 DCLK3Q9C098 648 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 NUCKS1Q9H1E3 243 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 HAUS4Q9H6D7 363 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 DLGAP2Q9P1A6 1054 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 AGO1Q9UL18 857 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 ZNF510Q9Y2H8 683 aa10.16□□□□□ -0.78
LINC00339-210ENST00000635675 MRPS17Q9Y2R5 130 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 LUC7L2Q9Y383 392 aaKnown RBP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.16□□□□□ -0.78
LINC00339-210ENST00000635675 ZNF318Q5VUA4 2279 aa10.15□□□□□ -0.78
LINC00339-210ENST00000635675 FAM170AA1A519 330 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TRDMT1O14717 391 aaKnown RBP10.15□□□□□ -0.79
LINC00339-210ENST00000635675 CAPN9O14815 690 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 GRAP2O75791 330 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 ADH1CP00326 375 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 SKILP12757 684 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TNFAIP3P21580 790 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 CASP14P31944 242 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 NSFP46459 744 aaKnown RBP10.15□□□□□ -0.79
LINC00339-210ENST00000635675 HARS2P49590 506 aaKnown RBP10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TBX4P57082 545 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 PITX1P78337 314 aaPredicted RBP10.15□□□□□ -0.79
LINC00339-210ENST00000635675 KLHL30Q0D2K2 578 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 NNTQ13423 1086 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 UBXN2BQ14CS0 331 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 DCAF6Q58WW2 860 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TMEM196Q5HYL7 178 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 ZNF571Q7Z3V5 609 aaPredicted RBP10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TMEM25Q86YD3 366 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 DENND1CQ8IV53 801 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 VSTM4Q8IW00 320 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 ADAM32Q8TC27 787 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 SLC39A13Q96H72 371 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 SERPINB11Q96P15 392 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 FBRSL1Q9HCM7 1045 aaKnown RBP10.15□□□□□ -0.79
LINC00339-210ENST00000635675 SPHK2Q9NRA0 654 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 STOML2Q9UJZ1 356 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TMEM59LQ9UK28 342 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 TLR6Q9Y2C9 796 aa10.15□□□□□ -0.79
LINC00339-210ENST00000635675 KMT2EQ8IZD2 1858 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms