RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 KRTAP10-12P60413 245 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 YPEL5P62699 121 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 PPATQ06203 517 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 SLC13A2Q13183 592 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CTBP1Q13363 440 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MTX1Q13505 466 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RAB32Q13637 225 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 E2F2Q14209 437 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 KIF22Q14807 665 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CNN3Q15417 329 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 NFE2Q16621 373 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 PRTGQ2VWP7 1150 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 LONRF3Q496Y0 759 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ANO6Q4KMQ2 910 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 HSP90AB2PQ58FF8 381 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RNF220Q5VTB9 566 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CACHD1Q5VU97 1274 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 SFRP4Q6FHJ7 346 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ANO7Q6IWH7 933 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CXorf57Q6NSI4 855 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 DARS2Q6PI48 645 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 KSR2Q6VAB6 950 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 B4GALNT4Q76KP1 1039 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MAEAQ7L5Y9 396 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 EPM2AIP1Q7L775 607 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 BCDIN3DQ7Z5W3 292 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 COL23A1Q86Y22 540 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM90A1Q86YD7 464 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 DNAJC5GQ8N7S2 189 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MAGEB6Q8N7X4 407 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM156AQ8NDB6 213 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 OR6B3Q8NGW1 331 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ADAMTS18Q8TE60 1221 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 NUDCD2Q8WVJ2 157 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 DDX17Q92841 729 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 NEUROG1Q92886 237 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ATP2A3Q93084 1043 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MED30Q96HR3 178 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ZFYVE19Q96K21 471 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 FAM84BQ96KN1 310 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 AIFM3Q96NN9 605 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MOGAT1Q96PD6 335 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 TAAR9Q96RI9 348 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 THAP7Q9BT49 309 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 STK31Q9BXU1 1019 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MS4A7Q9GZW8 240 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ZMAT3Q9HA38 289 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ZNF287Q9HBT7 754 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 GPR35Q9HC97 309 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 TCF7L1Q9HCS4 588 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 PLSCR4Q9NRQ2 329 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 C1orf112Q9NSG2 853 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 GJB4Q9NTQ9 266 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 TBC1D23Q9NUY8 699 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 RLIMQ9NVW2 624 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 CPNE7Q9UBL6 633 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 GABBR1Q9UBS5 961 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 LPAR3Q9UBY5 353 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 DDX20Q9UHI6 824 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 MRPS17Q9Y2R5 130 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 THRAP3Q9Y2W1 955 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 PLEKHM1Q9Y4G2 1056 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 PCDHGB6Q9Y5F9 930 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 E9PCH4 1651 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 TET3O43151 1660 aa1.34□□□□□ -2.19
SMARCB1-209ENST00000635578 ARHGEF12Q9NZN5 1544 aa1.34□□□□□ -2.2
SMARCB1-209ENST00000635578 KDM5BQ9UGL1 1544 aa1.34□□□□□ -2.2
SMARCB1-209ENST00000635578 PPLO60437 1756 aa1.34□□□□□ -2.2
SMARCB1-209ENST00000635578 UGGT1Q9NYU2 1555 aa1.34□□□□□ -2.2
SMARCB1-209ENST00000635578 TTC3P53804 2025 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 SBF2Q86WG5 1849 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 DEPDC5O75140 1603 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 DNMT1P26358 1616 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 LTBP4Q8N2S1 1624 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 EIF2AK4Q9P2K8 1649 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 NRXN3Q9Y4C0 1643 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 YEATS2Q9ULM3 1422 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 SHPRHQ149N8 1683 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 PTPRMP28827 1452 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 NUP153P49790 1475 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 RAPGEF2Q9Y4G8 1499 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 NUP188Q5SRE5 1749 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 NRAPQ86VF7 1730 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 FMN2Q9NZ56 1722 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 PRSS29PA6NIE9 313 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 RHPN2P1A8MT19 583 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 TMEM233B4DJY2 109 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 H3BML4 177 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 RAB27BO00194 218 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 PSMD9O00233 223 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 DCLK1O15075 740 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 PQBP1O60828 265 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 SOCS5O75159 536 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 TUSC2O75896 110 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 TJP3O95049 919 aa1.33□□□□□ -2.2
SMARCB1-209ENST00000635578 PARNO95453 639 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms