RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CASC3O15234 703 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CYTIPO60759 359 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TACC1O75410 805 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FTLP02792 175 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ALPPP05187 535 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PRKCBP05771 671 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 GALTP07902 379 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SNRPB2P08579 225 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ALPPL2P10696 532 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ALADP13716 330 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 KRT4P19013 534 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 LTKP29376 864 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ALDH4A1P30038 563 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 GRK4P32298 578 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SLC16A1P53985 500 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 HUNKP57058 714 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ASIC1P78348 528 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 NKX3-2P78367 333 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DSC2Q02487 901 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 RNASELQ05823 741 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FGL2Q14314 439 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 INPP5AQ14642 412 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 IRF3Q14653 427 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 GPR68Q15743 365 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SGO2Q562F6 1265 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 EMC10Q5UCC4 262 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 HHATQ5VTY9 493 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 NOTUMQ6P988 496 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CATSPERGQ6ZRH7 1159 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ARHGAP36Q6ZRI8 547 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 C16orf59Q7L2K0 433 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ARMCX2Q7L311 632 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ANKS1BQ7Z6G8 1248 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TAF8Q7Z7C8 310 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DSG4Q86SJ6 1040 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MICU3Q86XE3 530 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 SCYL3Q8IZE3 742 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 POMGNT2Q8NAT1 580 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 METTL6Q8TCB7 284 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 ZKSCAN4Q969J2 545 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PLPPR2Q96GM1 343 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 VCPIP1Q96JH7 1222 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FAM84AQ96KN4 292 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC140Q96MF4 163 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 PUS3Q9BZE2 481 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 FAM129AQ9BZQ8 928 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TAF1DQ9H5J8 278 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 DCTPP1Q9H773 170 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TTC12Q9H892 705 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 NDFIP2Q9NV92 336 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TMEM184CQ9NVA4 438 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 TMOD2Q9NZR1 351 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MRPL15Q9P015 296 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 NDUFAF4Q9P032 175 aa5.09□□□□□ -1.59
SDCBP-213ENST00000630925 CGGBP1Q9UFW8 167 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MTRF1LQ9UGC7 380 aaKnown RBP5.09□□□□□ -1.59
SDCBP-213ENST00000630925 MYO5CQ9NQX4 1742 aa5.09□□□□□ -1.6
SDCBP-213ENST00000630925 FAM135AQ9P2D6 1515 aa5.09□□□□□ -1.6
SDCBP-213ENST00000630925 SHOXO15266 292 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 YKT6O15498 198 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ZSCAN9O15535 394 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CIDEAO60543 219 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 UBOX5O94941 541 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 B3GALT4O96024 378 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 UBTFL6P0CB48 400 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MYL4P12829 197 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NPR1P16066 1061 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PRKACBP22694 351 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 GLRA2P23416 452 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CPT2P23786 658 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 RFC2P35250 354 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 LONP1P36776 959 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PTGER3P43115 390 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CDR1P51861 262 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 BLVRAP53004 296 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SUMO3P55854 103 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ERVFC1P60507 584 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NKX6-1P78426 367 aaPredicted RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PRKCEQ02156 737 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 DCTN2Q13561 401 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 PDPK2PQ6A1A2 396 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 FBXO38Q6PIJ6 1188 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CHST3Q7LGC8 479 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ERO1BQ86YB8 467 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 SLC22A9Q8IVM8 553 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 TTC5Q8N0Z6 440 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 USHBP1Q8N6Y0 703 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 FAM181AQ8N9Y4 354 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 ADCY4Q8NFM4 1077 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 MIPOL1Q8TD10 442 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 KCNE4Q8WWG9 221 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 STAMQ92783 540 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 NXPE3Q969Y0 559 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 RGMAQ96B86 450 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 IQCDQ96DY2 449 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 CCDC77Q9BR77 488 aa5.08□□□□□ -1.6
SDCBP-213ENST00000630925 LLPHQ9BRT6 129 aaKnown RBP5.08□□□□□ -1.6
SDCBP-213ENST00000630925 WDR18Q9BV38 432 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms