RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 STKLD1Q8NE28 680 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 APPL2Q8NEU8 664 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 NELFBQ8WX92 580 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ELSPBP1Q96BH3 223 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ACO2Q99798 780 aaKnown RBP5.15□□□□□ -1.58
LINC00550-201ENST00000629293 RUSC1Q9BVN2 902 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 OSBPL6Q9BZF3 934 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ARRDC1-AS1Q9H2J1 176 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 MAGEF1Q9HAY2 307 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 ARHGEF4Q9NR80 690 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 MAGED2Q9UNF1 606 aaPredicted RBP5.15□□□□□ -1.58
LINC00550-201ENST00000629293 BACE2Q9Y5Z0 518 aa5.15□□□□□ -1.58
LINC00550-201ENST00000629293 URB1O60287 2271 aaKnown RBP5.15□□□□□ -1.59
LINC00550-201ENST00000629293 PCNX2A6NKB5 2137 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 SLC22A31A6NKX4 558 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CLDN3O15551 220 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 TPD52L2O43399 206 aaKnown RBP5.15□□□□□ -1.59
LINC00550-201ENST00000629293 EXTL3O43909 919 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 RHOBTB3O94955 611 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 HTR3BO95264 441 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CCDC175P0C221 793 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 FCARP24071 287 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 PRCPP42785 496 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 EPHB3P54753 998 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 RING1Q06587 406 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 FAM187BQ17R55 369 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 MGAT5BQ3V5L5 792 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 FILIP1LQ4L180 1135 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 GPR158Q5T848 1215 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 KRT79Q5XKE5 535 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 OVOS1Q6IE37 1185 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 SLC8B1Q6J4K2 584 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CD300LGQ6UXG3 332 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 RSRC2Q7L4I2 434 aaKnown RBP5.15□□□□□ -1.59
LINC00550-201ENST00000629293 DDX42Q86XP3 938 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CNGA4Q8IV77 575 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 SHKBP1Q8TBC3 707 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CLDN23Q96B33 292 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CDK5RAP3Q96JB5 506 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 C8orf48Q96LL4 319 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 AK8Q96MA6 479 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 UROC1Q96N76 676 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 DESI2Q9BSY9 194 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 POLR3CQ9BUI4 534 aaPredicted RBP5.15□□□□□ -1.59
LINC00550-201ENST00000629293 CUEDC2Q9H467 287 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 PRDM4Q9UKN5 801 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 TNFSF13BQ9Y275 285 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 INVSQ9Y283 1065 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 SPTA1P02549 2419 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 VWA8A3KMH1 1905 aa5.15□□□□□ -1.59
LINC00550-201ENST00000629293 KCNJ18B7U540 433 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ZRANB2O95218 330 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RETP07949 1114 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 CASP14P31944 242 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RPS9P46781 194 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 GNG11P61952 73 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 FZD5Q13467 585 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 KCNJ12Q14500 433 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 COBLL1Q53SF7 1204 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 CDCP2Q5VXM1 449 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 LAIR1Q6GTX8 287 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TCEAL6Q6IPX3 200 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 LRFN4Q6PJG9 635 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PRR23CQ6ZRP0 262 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 HAUS6Q7Z4H7 955 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 STRA8Q7Z7C7 330 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TCEAL8Q8IYN2 117 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 DNASE1L2Q92874 299 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TCEAL3Q969E4 200 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RSPRY1Q96DX4 576 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RTKNQ9BST9 563 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 GTPBP4Q9BZE4 634 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RXFP3Q9NSD7 469 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 AFF4Q9UHB7 1163 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 NCANO14594 1321 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 DMXL2Q8TDJ6 3036 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 NAV2Q8IVL1 2488 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 AKAP13Q12802 2813 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 NPHP3-ACAD11A0A0J9YXS1 232 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 LGALS16A8MUM7 142 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 RNF225M0QZC1 329 aaPredicted RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PPEF2O14830 753 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 HNRNPDLO14979 420 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 SYN3O14994 580 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 URI1O94763 535 aaPredicted RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ABLIM3O94929 683 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 KRT18P05783 430 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 CHRNB1P11230 501 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 CASQ1P31415 396 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TNFSF9P41273 254 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 MAGEA9P43362 315 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PMS1P54277 932 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 PLD1Q13393 1074 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ARHGAP29Q52LW3 1261 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 FBXW10Q5XX13 1052 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TRIM68Q6AZZ1 485 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 TTI2Q6NXR4 508 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 MPZL3Q6UWV2 235 aa5.14□□□□□ -1.59
LINC00550-201ENST00000629293 CELF5Q8N6W0 485 aaKnown RBP5.14□□□□□ -1.59
LINC00550-201ENST00000629293 ZNF507Q8TCN5 953 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms