RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 C15orf38-AP3S2A0A0A6YYH1 394 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 TRAFD1O14545 582 aaPredicted RBP11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 TPP1O14773 563 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 GPD1P21695 349 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 GRIA1P42261 906 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 FOLH1Q04609 750 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 ZNF252P-AS1Q0IIN9 211 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 KRT72Q14CN4 511 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 CTC1Q2NKJ3 1217 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 PPM1JQ5JR12 505 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 ARPINQ7Z6K5 226 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 SGF29Q96ES7 293 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 KCNK16Q96T55 309 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 SEMA6AQ9H2E6 1030 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 C17orf75Q9HAS0 396 aa11.77□□□□□ -0.52
PCDHGA11-203ENST00000622044 CNTNAP2Q9UHC6 1331 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 ITM2AO43736 263 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 CXCL8P10145 99 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 RALBP11234 206 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 MLH1P40692 756 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 YWHAZP63104 245 aaKnown RBP11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 AMHR2Q16671 573 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 CMC1Q7Z7K0 106 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 SUDS3Q9H7L9 328 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 RIPK3Q9Y572 518 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 MT-CO1P00395 513 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 GJB1P08034 283 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 ACO1P21399 889 aaKnown RBP11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 SH3BGRP55822 239 aaPredicted RBP11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 MCUQ8NE86 351 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 FAM172AQ8WUF8 416 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.53
PCDHGA11-203ENST00000622044 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 TPST1O60507 370 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 MAGEC1O60732 1142 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 CSPG5O95196 566 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 P4HA1P13674 534 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 LCP1P13796 627 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 ARL4AP40617 200 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 IFRD2Q12894 506 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 LRRC38Q5VT99 294 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 PID1Q7Z2X4 250 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 SNX32Q86XE0 403 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 NCAPG2Q86XI2 1143 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 C10orf107Q8IVU9 208 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 DTNBP1Q96EV8 351 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 CDRT15Q96T59 188 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 CCT7Q99832 543 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 KCNK13Q9HB14 408 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 PREBQ9HCU5 417 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 GTSE1Q9NYZ3 720 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 KLHL8Q9P2G9 620 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 TLK1Q9UKI8 766 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 RPS6KL1Q9Y6S9 549 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 LSM8O95777 96 aaKnown RBP11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 SERPINA6P08185 405 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 ERVK-10P10266 1014 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 ADORA2BP29275 332 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 ARL1P40616 181 aaPredicted RBP11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 CHN2P52757 468 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 FOXB2Q5VYV0 432 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 LCA5Q86VQ0 697 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 RNF135Q8IUD6 432 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 MPP5Q8N3R9 675 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 NAT14Q8WUY8 206 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 EURLQ9NYK6 297 aa11.76□□□□□ -0.53
PCDHGA11-203ENST00000622044 CASQ2O14958 399 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 SIN3BO75182 1162 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 OATP04181 439 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 BPGMP07738 259 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 UQCRBP14927 111 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 AVPR1AP37288 418 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 RAB6CQ53S08 254 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 KDELC2Q7Z4H8 507 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 OR6B3Q8NGW1 331 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 ZNF669Q96BR6 464 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 CDHR1Q96JP9 859 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 DCUN1D5Q9BTE7 237 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 WDR55Q9H6Y2 383 aaPredicted RBP11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 EPS15L1Q9UBC2 864 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 MRPL42Q9Y6G3 142 aaKnown RBP11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 WDR46O15213 610 aaKnown RBP11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 TGDSO95455 350 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 ERBB2P04626 1255 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 MGAT1P26572 445 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 GALK1P51570 392 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 STAT5BP51692 787 aa11.75□□□□□ -0.53
PCDHGA11-203ENST00000622044 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms