RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 ZCCHC2Q9C0B9 1178 aaKnown RBP11.71□□□□□ -0.54
CLIP1-219ENST00000620786 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 CFAP73A6NFT4 308 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 F8VZ95 297 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 MYO1CO00159 1063 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 NCAM2O15394 837 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 SERPINF2P08697 491 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 CYP2A7P20853 494 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 AGBL2Q5U5Z8 902 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 CCDC126Q96EE4 140 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 KCNK16Q96T55 309 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 OMDQ99983 421 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.54
CLIP1-219ENST00000620786 ISCUQ9H1K1 167 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 CYP4F12Q9HCS2 524 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 RAB23Q9ULC3 237 aa11.71□□□□□ -0.54
CLIP1-219ENST00000620786 MRPL42Q9Y6G3 142 aaKnown RBP11.71□□□□□ -0.54
CLIP1-219ENST00000620786 KIAA1210Q9ULL0 1709 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 TMEM120BA0PK00 339 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 KPNA3O00505 521 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 AKAP3O75969 853 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 RECQL4O94761 1208 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CPSF4O95639 269 aaKnown RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 GUCA1AP43080 201 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CYTH1Q15438 398 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 MOB2Q70IA6 237 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 STRA8Q7Z7C7 330 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 TMEM86AQ8N2M4 240 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 SH2D3CQ8N5H7 860 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ADAM32Q8TC27 787 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 MAGED4Q96JG8 741 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 IQGAP1P46940 1657 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ATP5BP06576 529 aaKnown RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 PKN1Q16512 942 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 TADA1Q96BN2 335 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 PADI4Q9UM07 663 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 HNRNPRO43390 633 aaKnown RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CORO1BQ9BR76 489 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CTNNAL1Q9UBT7 734 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 TLL1O43897 1013 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 PROSCO94903 275 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 SP100P23497 879 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 BCL2L1Q07817 233 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ITGA9Q13797 1035 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 PABPC1LQ4VXU2 614 aaKnown RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 TMEM159Q96B96 161 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 PPP1R16AQ96I34 528 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 TMEM121Q9BTD3 319 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 RNF19AQ9NV58 838 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 GSNP06396 782 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CNGA3Q16281 694 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CYP51A1Q16850 503 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CBWD3Q5JTY5 395 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 CBWD5Q5RIA9 395 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ZPBP2Q6X784 338 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 MIER2Q8N344 545 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ILKAPQ9H0C8 392 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-219ENST00000620786 ASAH2Q9NR71 780 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 VANGL2Q9ULK5 521 aa11.7□□□□□ -0.54
CLIP1-219ENST00000620786 A0A087X0T9 212 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 FAM228BP0C875 321 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CTSEP14091 401 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 YWHAZP63104 245 aaKnown RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 GRAMD4Q6IC98 578 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CCNI2Q6ZMN8 369 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CASP10Q92851 521 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 VPS50Q96JG6 964 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 PACSIN1Q9BY11 444 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CEP41Q9BYV8 373 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CARD9Q9H257 536 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 GPAMQ9HCL2 828 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 NDUFV1P49821 464 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 PWP1Q13610 501 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 MYBPC2Q14324 1141 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CLEC17AQ6ZS10 378 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 GLT6D1Q7Z4J2 308 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 SETD3Q86TU7 594 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 SENP8Q96LD8 212 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 AGRPO00253 132 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 HOXA10P31260 410 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CCNG1P51959 295 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CSHL1Q14406 222 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 FBXL19Q6PCT2 694 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 KIAA1324Q6UXG2 1013 aaKnown RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 B3GALNT2Q8NCR0 500 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 ZBTB45Q96K62 511 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 DEFB118Q96PH6 123 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 USP15Q9Y4E8 981 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-219ENST00000620786 A8MX80 341 aa11.69□□□□□ -0.54
CLIP1-219ENST00000620786 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms