RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 PPP1R2P3Q6NXS1 205 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 ZNF571Q7Z3V5 609 aaPredicted RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 DNAJB7Q7Z6W7 309 aaPredicted RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 NOP9Q86U38 636 aaKnown RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 CRYBG2Q8N1P7 616 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 LEMD2Q8NC56 503 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 DEFB124Q8NES8 71 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 RPLP0P6Q8NHW5 317 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 BPIFB1Q8TDL5 484 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 KBTBD7Q8WVZ9 684 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 ZCCHC14Q8WYQ9 949 aaKnown RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 E2F7Q96AV8 911 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 CHFRQ96EP1 664 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 MSANTD3Q96H12 275 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 LOXL4Q96JB6 756 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 HEXIM2Q96MH2 286 aaKnown RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 SYT11Q9BT88 431 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.72□□□□□ -0.85
SYN3-213ENST00000619146 TPSD1Q9BZJ3 242 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 PDCL3Q9H2J4 239 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 DDX43Q9NXZ2 648 aaKnown RBP9.72□□□□□ -0.85
SYN3-213ENST00000619146 CDH9Q9ULB4 789 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 CCL26Q9Y258 94 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 CEP83Q9Y592 693 aa9.72□□□□□ -0.85
SYN3-213ENST00000619146 MTMR11A4FU01 709 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 EIF3CLB5ME19 914 aaKnown RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 THAP12O43422 761 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 LCA5LO95447 670 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 CCDC175P0C221 793 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 MAPRE1Q15691 268 aaKnown RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 CNGA2Q16280 664 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ZNF394Q53GI3 561 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ARHGAP15Q53QZ3 475 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 SGO2Q562F6 1265 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 C19orf48Q6RUI8 117 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 RAD9BQ6WBX8 426 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ARMCX6Q7L4S7 300 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 MAB21L3Q8N8X9 362 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 KDF1Q8NAX2 398 aaPredicted RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 SLC4A11Q8NBS3 891 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 SLC30A5Q8TAD4 765 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 RIN3Q8TB24 985 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ZNF606Q8WXB4 792 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 EIF3CQ99613 913 aaKnown RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 ACBD6Q9BR61 282 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 TMEM121BQ9BXQ6 578 aaPredicted RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 ZNF518BQ9C0D4 1074 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ELOVL4Q9GZR5 314 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 LHX5Q9H2C1 402 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 HPS4Q9NQG7 708 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 FSCN3Q9NQT6 498 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 SEPT11Q9NVA2 429 aaKnown RBP9.71□□□□□ -0.86
SYN3-213ENST00000619146 HMGXB4Q9UGU5 601 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ADAMTS1Q9UHI8 967 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ZKSCAN5Q9Y2L8 839 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 CELSR3Q9NYQ7 3312 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 ASXL3Q9C0F0 2248 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 KNL1Q8NG31 2342 aa9.71□□□□□ -0.86
SYN3-213ENST00000619146 FLNBO75369 2602 aaKnown RBP9.7□□□□□ -0.86
SYN3-213ENST00000619146 HELZ2Q9BYK8 2649 aaKnown RBP9.7□□□□□ -0.86
SYN3-213ENST00000619146 APC2O95996 2303 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 A0A087X0T9 212 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 SPAARA0A1B0GVQ0 90 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 OR6C75A6NL08 312 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 O00370 1275 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 DDX3XO00571 662 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYN3-213ENST00000619146 ZSCAN12O43309 604 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 FAM228BP0C875 321 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 GZMAP12544 262 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 CHRNB2P17787 502 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 PTPN1P18031 435 aaKnown RBP9.7□□□□□ -0.86
SYN3-213ENST00000619146 BCKDHBP21953 392 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 BRD2P25440 801 aaKnown RBP9.7□□□□□ -0.86
SYN3-213ENST00000619146 HOXA6P31267 233 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 MAPK8P45983 427 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 GALK1P51570 392 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 DGKEP52429 567 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 MLLT6P55198 1093 aaPredicted RBP9.7□□□□□ -0.86
SYN3-213ENST00000619146 SEC13P55735 322 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 TSPY1Q01534 308 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 GRSF1Q12849 480 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYN3-213ENST00000619146 RUNX3Q13761 415 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 ELF2Q15723 593 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 TAF12Q16514 161 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 MGAT5BQ3V5L5 792 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 DAB2IPQ5VWQ8 1189 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 ARHGAP17Q68EM7 881 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 ALKBH5Q6P6C2 394 aaKnown RBP9.7□□□□□ -0.86
SYN3-213ENST00000619146 C1orf228Q6PIY5 440 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 LCLAT1Q6UWP7 414 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 ACOT1Q86TX2 421 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 ZSCAN30Q86W11 494 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 OSTM1Q86WC4 334 aa9.7□□□□□ -0.86
SYN3-213ENST00000619146 B3GALNT2Q8NCR0 500 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms