RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 PLA2G4FQ68DD2 849 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 POTEHQ6S545 545 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 FBXO11Q86XK2 927 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 DAW1Q8N136 415 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 PIWIL2Q8TC59 973 aaKnown RBP11.19□□□□□ -0.62
UPF3A-212ENST00000619079 RSAD2Q8WXG1 361 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 ITPKCQ96DU7 683 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 SERPINI1Q99574 410 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 C11orf70Q9BRQ4 267 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 NUF2Q9BZD4 464 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 TBC1D23Q9NUY8 699 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 ARHGAP26Q9UNA1 814 aa11.19□□□□□ -0.62
UPF3A-212ENST00000619079 TRIM43BA6NCK2 446 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 BOLA2-SMG1P6H3BVE0 249 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 ZBTB39O15060 712 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 PIAS1O75925 651 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 ZBED1O96006 694 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 ADRB2P07550 413 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 BPGMP07738 259 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 WEE2P0C1S8 567 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 ENPEPQ07075 957 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 RWDD4Q6NW29 188 aaKnown RBP11.18□□□□□ -0.62
UPF3A-212ENST00000619079 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 HIPK4Q8NE63 616 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 PPP1R14CQ8TAE6 165 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 TAS1R2Q8TE23 839 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 C17orf50Q8WW18 174 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 WNK4Q96J92 1243 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 CORO1BQ9BR76 489 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 MECRQ9BV79 373 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 KLHL11Q9NVR0 708 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 CCDC195A0A1B0GUA6 201 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 TMEM247A6NEH6 219 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 TISP43B9A030 160 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 H3BSA7 217 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 SIN3BO75182 1162 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 KRT38O76015 456 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 L1CAMP32004 1257 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 YWHAGP61981 247 aaKnown RBP eCLIP11.18□□□□□ -0.62
UPF3A-212ENST00000619079 GTF2BQ00403 316 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 MTMR2Q13614 643 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 PADI6Q6TGC4 694 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 CDHR3Q6ZTQ4 885 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 CYP2W1Q8TAV3 490 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 CCDC127Q96BQ5 260 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 HHIPL1Q96JK4 782 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 COX4I2Q96KJ9 171 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 CAPNS2Q96L46 248 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 EBF4Q9BQW3 602 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 FRMD8Q9BZ67 464 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-212ENST00000619079 MAF1Q9H063 256 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
UPF3A-212ENST00000619079 PRPF19Q9UMS4 504 aaKnown RBP11.18□□□□□ -0.62
UPF3A-212ENST00000619079 TDRKHQ9Y2W6 561 aaKnown RBP11.18□□□□□ -0.62
UPF3A-212ENST00000619079 A0A0B4J269 797 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 KBTBD13C9JR72 458 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 ZNF12P17014 697 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 ITGAXP20702 1163 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 ELK3P41970 407 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 CDKN2BP42772 138 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 NOMO3P69849 1222 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 PPIL2Q13356 520 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 TUBB3Q13509 450 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 TCHHL1Q5QJ38 904 aaPredicted RBP11.17□□□□□ -0.62
UPF3A-212ENST00000619079 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 IYDQ6PHW0 289 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 LPCAT2Q7L5N7 544 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 HPS6Q86YV9 775 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 TRIML2Q8N7C3 387 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 POU5F2Q8N7G0 328 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 TSPAN14Q8NG11 270 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
UPF3A-212ENST00000619079 CCT7Q99832 543 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 LXNQ9BS40 222 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 CYP4F11Q9HBI6 524 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 INIPQ9NRY2 104 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 DNAJC28Q9NX36 388 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 STK39Q9UEW8 545 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 CNOT11Q9UKZ1 510 aaKnown RBP11.17□□□□□ -0.62
UPF3A-212ENST00000619079 FADS3Q9Y5Q0 445 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 H0YJX3 145 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 SERPINB7O75635 380 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 TMEM63AO94886 807 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 SLC10A3P09131 477 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 CRHR1P34998 444 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 RPL22P35268 128 aaKnown RBP11.17□□□□□ -0.62
UPF3A-212ENST00000619079 HOXD12P35452 270 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 PPARGP37231 505 aaPredicted RBP11.17□□□□□ -0.62
UPF3A-212ENST00000619079 PHKA2P46019 1235 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 NAA20P61599 178 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 MRPS5P82675 430 aaKnown RBP11.17□□□□□ -0.62
UPF3A-212ENST00000619079 RELAQ04206 551 aa11.17□□□□□ -0.62
UPF3A-212ENST00000619079 GAD2Q05329 585 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms