RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SMG9Q9H0W8 520 aaKnown RBP5.51□□□□□ -1.53
SHMT1-211ENST00000618902 MED4Q9NPJ6 270 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 LUC7LQ9NQ29 371 aaKnown RBP5.51□□□□□ -1.53
SHMT1-211ENST00000618902 ARHGEF3Q9NR81 526 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 TDP1Q9NUW8 608 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 TRPM5Q9NZQ8 1165 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 CHORDC1Q9UHD1 332 aaPredicted RBP5.51□□□□□ -1.53
SHMT1-211ENST00000618902 FBXO4Q9UKT5 387 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 CAPN11Q9UMQ6 739 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 CCL26Q9Y258 94 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 LUC7L2Q9Y383 392 aaKnown RBP5.51□□□□□ -1.53
SHMT1-211ENST00000618902 SIT1Q9Y3P8 196 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 DAAM1Q9Y4D1 1078 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 USP3Q9Y6I4 520 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 CACNA1IQ9P0X4 2223 aa5.51□□□□□ -1.53
SHMT1-211ENST00000618902 CACNA1AO00555 2505 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CCDC163A0A0D9SF12 145 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 A0A1W2PQH9 124 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF840PA6NDX5 716 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 M0QYV0 167 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 MAP2K7O14733 419 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 XPO1O14980 1071 aaKnown RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 MDM4O15151 490 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PAPSS1O43252 624 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 NARSO43776 548 aaKnown RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ATG13O75143 517 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 TBX18O95935 607 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 GYPCP04921 128 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 FYNP06241 537 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 IVLP07476 585 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 MMEP08473 750 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 USP17L7P0C7H9 530 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 RFX1P22670 979 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 YWHAQP27348 245 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CDH5P33151 784 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CNR2P34972 360 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 EIF2DP41214 584 aaKnown RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PLA2G4AP47712 749 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CLCN6P51797 869 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 BCAT1P54687 386 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ADIGQ0VDE8 80 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 BST2Q10589 180 aaKnown RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 IFRD2Q12894 506 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PDCLQ13371 301 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 LRRC32Q14392 662 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 MLF2Q15773 248 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 HSF5Q4G112 596 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PTPN20Q4JDL3 420 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 C2CD6Q53TS8 623 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 HSP90B2PQ58FF3 399 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 GPR158Q5T848 1215 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 HGSNATQ68CP4 663 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CC2D1AQ6P1N0 951 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PARM1Q6UWI2 310 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 DNAAF5Q86Y56 855 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 FMNL3Q8IVF7 1028 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ARID3BQ8IVW6 561 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CCDC105Q8IYK2 499 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 SIX5Q8N196 739 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 SCML4Q8N228 414 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ARHGAP18Q8N392 663 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 MAB21L3Q8N8X9 362 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 C1orf131Q8NDD1 294 aaKnown RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 SPDYE1Q8NFV5 336 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PJA1Q8NG27 643 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ZSCAN18Q8TBC5 510 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 BPIFB1Q8TDL5 484 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 KCNV2Q8TDN2 545 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CSGALNACT1Q8TDX6 532 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 FGF14Q92915 247 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ATP2A3Q93084 1043 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ZFRQ96KR1 1074 aaKnown RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PCMTD1Q96MG8 357 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CPXM1Q96SM3 734 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CYP2S1Q96SQ9 504 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 DNAJC7Q99615 494 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 KXD1Q9BQD3 176 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 TRIM62Q9BVG3 475 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CARD6Q9BX69 1037 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 SLC4A5Q9BY07 1137 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PARD6BQ9BYG5 372 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ULBP1Q9BZM6 244 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 RNF38Q9H0F5 515 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ATXN3LQ9H3M9 355 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 SLITRK6Q9H5Y7 841 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 BRD9Q9H8M2 597 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 TBC1D14Q9P2M4 693 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 NUDT5Q9UKK9 219 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 PCDHGC3Q9UN70 934 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ARHGAP26Q9UNA1 814 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 SCML2Q9UQR0 700 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 ZNF510Q9Y2H8 683 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 EPN1Q9Y6I3 576 aaPredicted RBP5.5□□□□□ -1.53
SHMT1-211ENST00000618902 CEP250Q9BV73 2442 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 MYOFQ9NZM1 2061 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 DCHS1Q96JQ0 3298 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 COL4A3Q01955 1670 aa5.5□□□□□ -1.53
SHMT1-211ENST00000618902 TRAV19A0A0A6YYK7 116 aa5.49□□□□□ -1.53
SHMT1-211ENST00000618902 SHISA7A6NL88 538 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms